Factsheet for Os05t0212900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0212600-00	Rice	cytosol	67.6	87.75
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	93.37	85.71
Os10t0158400-00	Rice	cytosol	83.67	82.41
Os10t0167900-00	Rice	cytosol	80.61	79.2
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	63.52	78.55
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	51.53	76.23
Os10t0162856-00	Rice	cytosol	84.18	76.21
TraesCS4B01G357800.1	Wheat	cytosol	51.02	67.11
TraesCS4B01G357600.1	Wheat	mitochondrion	41.33	66.94
TraesCS2B01G041300.1	Wheat	cytosol	65.82	66.84
TraesCS4B01G357700.1	Wheat	mitochondrion	40.05	66.24
TraesCS2D01G030600.1	Wheat	mitochondrion	64.8	65.8
EES15184	Sorghum	cytosol	68.37	65.37
TraesCS4D01G351300.1	Wheat	mitochondrion	64.54	63.57
TraesCS6A01G015300.1	Wheat	cytosol	65.05	63.28
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	63.52	62.41
TraesCS4B01G357100.1	Wheat	mitochondrion	52.04	62.01
TraesCS6A01G015500.1	Wheat	cytosol, plastid	63.52	61.03
TraesCS6B01G022300.1	Wheat	cytosol	62.5	60.95
TraesCS6B01G022500.1	Wheat	cytosol	63.52	60.58
HORVU6Hr1G003020.2	Barley	cytosol	63.01	59.81
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	57.91	57.18
TraesCS6D01G018500.1	Wheat	plastid	63.27	56.62
Os07t0501100-01	Rice	cytosol	58.16	56.3
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.71	55.26
Os07t0271500-01	Rice	cytosol	53.57	52.24
Os07t0526400-01	Rice	cytosol	52.04	51.13
Os07t0525900-00	Rice	cytosol	51.53	50.75
Os11t0529800-00	Rice	cytosol, extracellular	50.26	49.13
Os11t0529500-00	Rice	cytosol	51.28	48.67
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	48.72	47.99
Os07t0525500-00	Rice	plastid	46.94	47.06
Os07t0214900-00	Rice	cytosol	46.94	45.66
Os10t0484800-01	Rice	cytosol	38.78	39.07
Os11t0566800-01	Rice	cytosol	39.54	38.85
Os01t0602600-00	Rice	cytosol	32.91	38.62
Os04t0103900-01	Rice	cytosol	38.27	38.17
Os07t0411300-00	Rice	cytosol	37.76	36.54
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.83	0.79

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4338103	MapMan:50.2.3	ProteinID:BAF16836.1	ProteinID:BAS92810.1	InterPro:Chalcone/stilbene_synth_C
InterPro:Chalcone/stilbene_synthase_N	ProteinID:EEE62742.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os05g0212900
EnsemblPlants:Os05t0212900-00	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23
InterPro:Polyketide_synthase_type-III	UniProt:Q0DJY7	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0000E123A6	RefSeq:XP_015638835.1
SEG:seg	:	:	:	:	:

Description

chalcone synthase, polyketide synthase 6Similar to Chalcone synthase J (EC 2.3.1.74) (Naringenin-chalcone synthase J). (Os05t0212900-00)

Coordinates

chr5:-:6991465..6993662

Molecular Weight (calculated)

42587.2 Da

IEP (calculated)

5.868

GRAVY (calculated)

-0.056

Length

392 amino acids

Sequence
(BLAST)

001: MPGAAAAAVV DSRLCTQHAE GPAAVLAIGT ANPANIVYQD GFADYYFGLT KSEHLIELKD KMKRICHRSG IEKRYIHLDD KLICEHPEII DKHMPSLETR
101: VDIVSTEVPK LAESATRKAI AEWGRPAIDI THLIFSTYSG CSAPSADLKL ASLLGLNPSV SRTILSLHGC SGGGRALQLA KELTENNRDA RVLVACAELT
201: LICFSNPDES KIVGHGLFGD GAGAIIVGAG PLVDEERPLF EMVLASQTTI PSTEHALGMQ TTASGIDFHL SIQVPTLIKD NIRQCLLDTF RSVGNMDPNW
301: NDLFWAVHPG GRAILDNIEG ELQLQPAKLA ASRHVLNEYG NMSGTTIAFV LDDLRRRREK EGDQHQQLEW GVMLAFGPGI TIEAMVLRNP LS

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.