Factsheet for TraesCS5B01G383300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G379400.1	Wheat	mitochondrion	88.95	90.34
TraesCS1D01G359600.1	Wheat	cytosol	75.32	74.37
HORVU5Hr1G093950.1	Barley	cytosol	76.35	73.7
OQU85107	Sorghum	cytosol	72.49	70.68
OQU85124	Sorghum	cytosol	72.49	70.68
KXG36274	Sorghum	cytosol	70.69	69.27
EER99418	Sorghum	cytosol	70.95	69.0
EES08732	Sorghum	cytosol	71.47	68.81
EES09995	Sorghum	cytosol	71.47	68.81
EES15677	Sorghum	cytosol	69.41	66.67
Os07t0501100-01	Rice	cytosol	64.52	61.98
TraesCS4B01G357800.1	Wheat	cytosol	46.53	60.74
TraesCS2B01G041300.1	Wheat	cytosol	60.15	60.62
TraesCS4B01G357100.1	Wheat	mitochondrion	49.36	58.36
TraesCS4B01G357600.1	Wheat	mitochondrion	36.25	58.26
TraesCS4B01G357700.1	Wheat	mitochondrion	35.22	57.81
TraesCS6B01G327900.1	Wheat	cytosol	49.36	57.48
TraesCS6B01G022300.1	Wheat	cytosol	58.87	56.97
TraesCS2B01G072600.1	Wheat	mitochondrion	58.61	56.86
TraesCS5B01G487700.1	Wheat	cytosol	56.81	55.81
TraesCS4B01G021600.1	Wheat	cytosol	57.33	55.61
TraesCS2B01G007000.1	Wheat	cytosol	57.07	55.5
TraesCS6B01G022500.1	Wheat	cytosol	57.58	54.5
TraesCS6B01G245200.1	Wheat	mitochondrion	46.79	54.17
TraesCS2B01G019200.1	Wheat	cytosol	55.27	54.16
TraesCS2B01G006000.1	Wheat	cytosol	54.24	53.55
TraesCS2B01G006800.1	Wheat	cytosol	51.16	53.49
TraesCS2B01G006700.1	Wheat	cytosol	53.47	52.79
TraesCS2B01G038700.1	Wheat	cytosol	50.9	50.25
TraesCS2B01G048400.1	Wheat	cytosol	50.9	50.25
TraesCS2B01G038600.1	Wheat	cytosol	46.27	49.72
TraesCS2B01G613100.1	Wheat	cytosol	50.64	49.37
TraesCS2B01G558400.1	Wheat	cytosol	50.13	48.99
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	49.61	48.86
TraesCS1B01G040100.1	Wheat	cytosol	49.61	48.86
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	49.36	48.61
TraesCS1B01G040500.1	Wheat	cytosol	49.61	48.37
TraesCS1B01G041000.1	Wheat	cytosol	48.59	47.85
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	49.36	47.76
TraesCS7B01G371700.1	Wheat	plastid	52.96	46.92
TraesCS2B01G006300.1	Wheat	extracellular, golgi	53.73	45.24
TraesCS7B01G462200.1	Wheat	cytosol	33.68	43.81
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	40.87	40.87
TraesCS1B01G176300.1	Wheat	cytosol	39.33	39.23
TraesCS5B01G003100.1	Wheat	cytosol	38.56	35.8
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.34	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS5B01G383300	EnsemblPlants:TraesCS5B01G383300.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr5B:+:562118513..562119777

Molecular Weight (calculated)

42375.3 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.013

Length

389 amino acids

Sequence
(BLAST)

001: MTTVHQIRRA QRADGPAAVL AIGTANPKGS MLQDDYADYY FRVTNSEHHA ELKDKLKRIC KKSGIERRYA HLDEELLSAH PDFSDRTLPT LDARIDMASA
101: AVPELGASAA VRAIAEWGRP VADVTHLVFS TYSGGKAPSA DLRLASLLGL RPTVSRIILS LNGCSGGGRA MQLAKELAEN NRGARVLLAC CELTLIAFYG
201: PQEGRLDTIL GHGIFGDGAG AVIIGADPVD CIERPLFEMV FATQTTIPET EDEITMRLMK GGLDFHVSVR VPKLLKSKIE RCLIDAFQSI GISAEWNDLF
301: WAIHPGGRAI LGQVEQLLGL GVDKLAASRR VLREYGNMSG ATVIFVLDEL RRRRARGEEV AEWGVMMAFG PGITIETMVL HATSILEEN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.