CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08732	Sorghum	cytosol	100.0	100.0
EES15677	Sorghum	cytosol	91.09	90.86
OQU85124	Sorghum	cytosol	85.89	86.97
OQU85107	Sorghum	cytosol	85.64	86.72
EER99418	Sorghum	cytosol	81.68	82.5
KXG36274	Sorghum	cytosol	80.94	82.37
TraesCS5A01G379400.1	Wheat	mitochondrion	69.31	73.11
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	70.05	72.75
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	68.81	71.47
TraesCS1D01G359600.1	Wheat	cytosol	69.31	71.07
TraesCS5A01G379600.1	Wheat	cytosol	59.16	69.28
Os07t0501100-01	Rice	cytosol	66.58	66.42
EES15184	Sorghum	cytosol	62.13	61.22
HORVU5Hr1G093950.1	Barley	cytosol	60.89	61.04
EER99419	Sorghum	cytosol	58.91	58.91
OQU83574	Sorghum	cytosol	54.46	54.32
KXG28549	Sorghum	cytosol	33.66	52.92
EES08596	Sorghum	cytosol	52.97	52.32
EES08602	Sorghum	cytosol, mitochondrion	52.23	52.1
EER95816	Sorghum	cytosol	55.45	52.09
EES08598	Sorghum	cytosol	51.49	51.49
EES14634	Sorghum	cytosol	50.49	51.26
EES09863	Sorghum	cytosol	50.74	51.12
EES08603	Sorghum	cytosol, mitochondrion	52.72	50.84
EES09860	Sorghum	cytosol	50.25	50.62
KXG29016	Sorghum	cytosol	50.25	50.62
EES09859	Sorghum	cytosol	50.25	50.62
EES08604	Sorghum	cytosol	50.25	50.62
EES09864	Sorghum	cytosol	50.0	50.5
EES09865	Sorghum	cytosol	50.0	50.37
EES09858	Sorghum	cytosol	50.0	50.37
EES09862	Sorghum	cytosol	50.0	50.37
OQU83573	Sorghum	cytosol	42.82	48.87
KXG28978	Sorghum	cytosol	37.87	48.73
OQU86627	Sorghum	mitochondrion	44.55	48.39
OQU83561	Sorghum	cytosol	38.37	48.29
EES15556	Sorghum	cytosol, mitochondrion	45.05	47.77
KXG28544	Sorghum	cytosol	43.81	47.33
EES09649	Sorghum	cytosol	43.07	43.28
OQU83321	Sorghum	cytosol	41.58	41.08
EER98407	Sorghum	cytosol	37.38	36.12
EER91459	Sorghum	cytosol	36.88	30.72
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.96	0.85

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	EntrezGene:8062654	EntrezGene:8062655	UniProt:C5Y4Z2	InterPro:Chalcone/stilbene_synth_C
InterPro:Chalcone/stilbene_synthase_N	ProteinID:EES08732.1	EnsemblPlants:EES09995	ProteinID:EES09995	ProteinID:EES09995.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877
PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3005G164300	SUPFAM:SSF53901	unigene:Sbi.21612	InterPro:Thiolase-like
UniParc:UPI0001A86664	RefSeq:XP_002449744.1	RefSeq:XP_002451007.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:63975291..63976997

Molecular Weight (calculated)

43447.1 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.094

Length

404 amino acids

Sequence
(BLAST)

001: MGSAPPAATV QEMRRAQRAD GPAAVLAIGT ANPPSIMPQD DYPDYYFRVT NSEHLTDLKA KLSRICNHNK SGIRQRYLHL NEELLAANPG FIDPKRPSLD
101: ERVEMASAAV PELAAKAAAK AIAEWGRPAT DITHLIFSTY SGARAPSGDR RLASLLGLRP TVSRTILSLH GCYGGGRALQ LAKELAENNR GARVLVACSE
201: LTLIAFYGPE GGCVDNIIGQ TLFGDGAGAV IVGADPVGAP AERPLFEMVF ASQTTIPETE DAISMQYSKC GMEYHLSSRV PRVLGSNVER CLVDTFRTLG
301: VSVAWNDLFW AIHPGGRAIL DNIEEVLRLE DGKLAASRHV LSEFGNMSGT TVIFVLDELR RRRAAAAKQG GQAPEWGVMM AFGPGITVET MVLHAPSNLE
401: LEGN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.