CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99996
KXG26308

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02050.1	EER99996	AT1G62940.1	23632852
AT1G02050.1	KXG26308	AT1G62940.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032662_P001	Maize	plastid	76.29	94.87
Zm00001d013991_P001	Maize	mitochondrion	77.94	89.79
TraesCS1B01G176300.1	Wheat	cytosol	69.48	86.41
TraesCS1A01G160300.1	Wheat	cytosol	69.48	86.41
Os10t0484800-01	Rice	cytosol	69.28	86.38
TraesCS1D01G157500.1	Wheat	cytosol	68.87	85.64
HORVU1Hr1G042510.2	Barley	cytosol	72.99	72.84
CDX93339	Canola	mitochondrion	49.69	61.32
KRH75257	Soybean	cytosol	48.87	61.08
CDY18415	Canola	cytosol, mitochondrion	49.48	61.07
VIT_15s0021g02170.t01	Wine grape	cytosol	48.66	60.67
AT1G02050.1	Thale cress	mitochondrion	49.28	60.51
PGSC0003DMT400095725	Potato	plastid	48.04	58.84
AT4G00040.1	Thale cress	cytosol, mitochondrion	46.39	58.44
CDX83215	Canola	mitochondrion	47.22	58.42
CDY21499	Canola	mitochondrion	47.01	58.16
Bra000559.1-P	Field mustard	mitochondrion	46.8	57.91
Solyc01g090600.2.1	Tomato	cytosol, extracellular, mitochondrion, peroxisome	41.44	56.15
EER98407	Sorghum	cytosol	42.47	49.28
KXG28978	Sorghum	cytosol	24.95	38.53
EER99419	Sorghum	cytosol	31.75	38.12
KXG28549	Sorghum	cytosol	20.0	37.74
OQU83561	Sorghum	cytosol	24.74	37.38
EES08732	Sorghum	cytosol	30.72	36.88
EES09995	Sorghum	cytosol	30.72	36.88
KXG36274	Sorghum	cytosol	30.1	36.78
EES15677	Sorghum	cytosol	30.52	36.54
EER99418	Sorghum	cytosol	30.1	36.5
OQU83573	Sorghum	cytosol	26.6	36.44
OQU86627	Sorghum	mitochondrion	27.84	36.29
OQU85124	Sorghum	cytosol	29.69	36.09
OQU85107	Sorghum	cytosol	29.69	36.09
EES09649	Sorghum	cytosol	29.9	36.07
OQU83574	Sorghum	cytosol	30.1	36.05
EES15184	Sorghum	cytosol	30.31	35.85
OQU83321	Sorghum	cytosol	30.1	35.7
EES14634	Sorghum	cytosol	29.07	35.43
KXG28544	Sorghum	cytosol	27.22	35.29
EES15556	Sorghum	cytosol, mitochondrion	27.63	35.17
EES09863	Sorghum	cytosol	29.07	35.16
EES09864	Sorghum	cytosol	28.87	35.0
EES08596	Sorghum	cytosol	29.48	34.96
KXG29016	Sorghum	cytosol	28.87	34.91
EES09860	Sorghum	cytosol	28.87	34.91
EES09859	Sorghum	cytosol	28.87	34.91
EES09865	Sorghum	cytosol	28.87	34.91
EES09858	Sorghum	cytosol	28.87	34.91
EES09862	Sorghum	cytosol	28.87	34.91
EES08604	Sorghum	cytosol	28.87	34.91
EES08598	Sorghum	cytosol	28.45	34.16
EES08602	Sorghum	cytosol, mitochondrion	28.45	34.07
EES08603	Sorghum	cytosol, mitochondrion	29.07	33.65
EER95816	Sorghum	cytosol	28.25	31.86
Bra017147.1-P	Field mustard	cytosol, peroxisome, plastid	52.78	28.64

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	UniProt:C5WYA2	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	EnsemblPlants:EER91459
ProteinID:EER91459	ProteinID:EER91459.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195
PFAM:PF02797	PANTHER:PTHR11877	PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3001G215000	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI00081ACA59	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:19809072..19812137

Molecular Weight (calculated)

53205.1 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.285

Length

485 amino acids

Sequence
(BLAST)

001: MGKITGQTKE GVERMNHLPP EKEEERDDQS VTYHVFAHAF FVSCKTTETK QTPPLRPRRL LKHPRCLPWP RRTRKSQQQC SIRNRKVVGQ GEPVLAVTMT
101: GGANGRSQQS SRGKAMLLAL GKGFPDQVLP QEKVVESYLQ DSSCDDPATR AKLERLCTTT TVRTRYTVMS KELLDKHPEL KMEGTPTLTP RLDICNAAVI
201: DLGAAAARAA LDDWGRPAAD ITHLIYISSS ELRLPGGDVH LAARLGLSPN TVRTSLLFLG CSGGAAALRT AKDIAENNPG SRVLVTAAET TVLGFRPPSY
301: DRPYDLVGAA LFGDGASAVI IGAGPMAPAE DPFLELEFST QEFLPGTDKV IDGKIAEEGI NFKLGRDLPE KIESRIEGFC RTLMNQVGIK DFNDVFWAVH
401: PGGPAILNRL EFCLELQPEK LKISRKALKN YGNVSSNTIF YVLEYLRDEL KKGAISEEWG LILAFGPGIT FEGLLVRGVK KTFTS

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.