Factsheet for AT1G02050.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93339	Canola	mitochondrion	92.15	92.62
CDY18415	Canola	cytosol, mitochondrion	91.65	92.11
VIT_15s0021g02170.t01	Wine grape	cytosol	78.23	79.43
KRH75257	Soybean	cytosol	77.47	78.87
AT4G00040.1	Thale cress	cytosol, mitochondrion	76.2	78.18
PGSC0003DMT400095725	Potato	plastid	74.68	74.49
Solyc01g090600.2.1	Tomato	cytosol, extracellular, mitochondrion, peroxisome	65.32	72.07
AT4G34850.1	Thale cress	cytosol	63.8	64.29
TraesCS1D01G157500.1	Wheat	cytosol	62.03	62.82
TraesCS1A01G160300.1	Wheat	cytosol	61.77	62.56
TraesCS1B01G176300.1	Wheat	cytosol	61.52	62.31
Os10t0484800-01	Rice	cytosol	61.01	61.95
Zm00001d032662_P001	Maize	plastid	61.01	61.79
Zm00001d013991_P001	Maize	mitochondrion	59.75	56.06
EER91459	Sorghum	cytosol	60.51	49.28
HORVU1Hr1G042510.2	Barley	cytosol	60.51	49.18
Bra017147.1-P	Field mustard	cytosol, peroxisome, plastid	92.15	40.72
AT5G13930.1	Thale cress	cytosol	39.24	39.24

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	EntrezGene:839280	UniProt:A0A178WKY7	ProteinID:AAC24368.1	ProteinID:AAY96717.1
ProteinID:AAY96718.1	ProteinID:AAY96726.1	ProteinID:AAY96730.1	ProteinID:AAY96731.1	ProteinID:AAY96732.1	ProteinID:AAY96735.1
ProteinID:AAY96736.1	ProteinID:AAY96739.1	ProteinID:AAY96744.1	ProteinID:AAY96747.1	ProteinID:AEE27371.1	ArrayExpress:AT1G02050
EnsemblPlantsGene:AT1G02050	RefSeq:AT1G02050	TAIR:AT1G02050	RefSeq:AT1G02050-TAIR-G	EnsemblPlants:AT1G02050.1	TAIR:AT1G02050.1
EMBL:BT030313	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009813	GO:GO:0009987	GO:GO:0010584	GO:GO:0016043	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	GO:GO:0019748	GO:GO:0030639	GO:GO:0080110	GO:GO:0090439	InterPro:IPR016039
Symbol:LAP6	RefSeq:NP_171707.1	UniProt:O23674	ProteinID:OAP18551.1	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0009066	PO:PO:0020100
PO:PO:0025022	PO:PO:0025313	PANTHER:PTHR11877	PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI00000481A3	SEG:seg	:	:	:

Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]

Coordinates

chr1:-:359117..360746

Molecular Weight (calculated)

43619.7 Da

IEP (calculated)

6.201

GRAVY (calculated)

-0.228

Length

395 amino acids

Sequence
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.