Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28549 | Sorghum | cytosol | 57.21 | 91.05 |
| EES08602 | Sorghum | cytosol, mitochondrion | 66.26 | 66.91 |
| EES08598 | Sorghum | cytosol | 65.77 | 66.58 |
| Os11t0529800-00 | Rice | cytosol, extracellular | 63.57 | 64.84 |
| EES08603 | Sorghum | cytosol, mitochondrion | 66.26 | 64.68 |
| OQU83574 | Sorghum | cytosol | 62.84 | 63.46 |
| Os11t0529500-00 | Rice | cytosol | 61.86 | 61.26 |
| EER99419 | Sorghum | cytosol | 57.7 | 58.42 |
| OQU85107 | Sorghum | cytosol | 53.79 | 55.14 |
| OQU85124 | Sorghum | cytosol | 53.55 | 54.89 |
| KXG36274 | Sorghum | cytosol | 53.06 | 54.66 |
| EER99418 | Sorghum | cytosol | 53.06 | 54.25 |
| KXG28978 | Sorghum | cytosol | 41.56 | 54.14 |
| OQU83561 | Sorghum | cytosol | 42.3 | 53.89 |
| EES15677 | Sorghum | cytosol | 52.81 | 53.33 |
| EES15556 | Sorghum | cytosol, mitochondrion | 49.63 | 53.28 |
| EES08732 | Sorghum | cytosol | 52.32 | 52.97 |
| EES09995 | Sorghum | cytosol | 52.32 | 52.97 |
| OQU86627 | Sorghum | mitochondrion | 46.94 | 51.61 |
| EER95816 | Sorghum | cytosol | 53.3 | 50.7 |
| KXG28544 | Sorghum | cytosol | 46.21 | 50.53 |
| EES15184 | Sorghum | cytosol | 50.61 | 50.49 |
| OQU83573 | Sorghum | cytosol | 43.28 | 50.0 |
| EES14634 | Sorghum | cytosol | 48.41 | 49.75 |
| EES09863 | Sorghum | cytosol | 48.66 | 49.63 |
| KXG29016 | Sorghum | cytosol | 48.41 | 49.38 |
| EES09862 | Sorghum | cytosol | 48.41 | 49.38 |
| EES09860 | Sorghum | cytosol | 48.41 | 49.38 |
| EES09859 | Sorghum | cytosol | 48.41 | 49.38 |
| EES08604 | Sorghum | cytosol | 48.41 | 49.38 |
| EES09865 | Sorghum | cytosol | 48.17 | 49.13 |
| EES09858 | Sorghum | cytosol | 48.17 | 49.13 |
| EES09864 | Sorghum | cytosol | 47.68 | 48.75 |
| EES09649 | Sorghum | cytosol | 38.14 | 38.81 |
| OQU83321 | Sorghum | cytosol | 37.9 | 37.9 |
| EER98407 | Sorghum | cytosol | 37.16 | 36.36 |
| EER91459 | Sorghum | cytosol | 34.96 | 29.48 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.18 | 0.69 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | EntrezGene:8064810 | UniProt:C5Y3E3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| EnsemblPlants:EES08596 | ProteinID:EES08596 | ProteinID:EES08596.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF29 | InterPro:Polyketide_synthase_type-III |
| EnsemblPlantsGene:SORBI_3005G135300 | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI0001A8645A | RefSeq:XP_002449608.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:+:58418506..58420220
Molecular Weight (calculated)
43340.1 Da
IEP (calculated)
6.951
GRAVY (calculated)
0.070
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIAEKVTV LEDLRRAQRA NGPAAVLAIG TATPANCVLQ DQFPDWYFRV TRSDHLTKLK AKMTRICNKS GIKKRYFHHT EETISRHPEF LDRALPSLGA
101: RLRTTADAVA ELAAAAAGAA IAEWGRPAAD ITHLVVATNS GADEPGADLR LALLLGLRPT VRRTLLYLHG CSAGLVAIRV ARDIAENNRG ARVLVACAHT
201: VLLTFGAPDE ARLDALVTSA LFADGAGAVV VGADPVLPVE RPVFHLVSSA QATLPATERT VGISLGESGV EYGVSVEVPA LVRDSIERCL ADSMAPLGLA
301: NAKDGGGGGG WNWNSLFWAV HPGGRALLDS YEAALGLETA KLAASRRVLA EHGNMLGATI IFVLDEIRRR HQDGGEEKVD CKWGIMTGLG PGLTIETIVL
401: HTAGSRNED
101: RLRTTADAVA ELAAAAAGAA IAEWGRPAAD ITHLVVATNS GADEPGADLR LALLLGLRPT VRRTLLYLHG CSAGLVAIRV ARDIAENNRG ARVLVACAHT
201: VLLTFGAPDE ARLDALVTSA LFADGAGAVV VGADPVLPVE RPVFHLVSSA QATLPATERT VGISLGESGV EYGVSVEVPA LVRDSIERCL ADSMAPLGLA
301: NAKDGGGGGG WNWNSLFWAV HPGGRALLDS YEAALGLETA KLAASRRVLA EHGNMLGATI IFVLDEIRRR HQDGGEEKVD CKWGIMTGLG PGLTIETIVL
401: HTAGSRNED
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.