CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15556	Sorghum	cytosol, mitochondrion	75.54	73.75
TraesCS6D01G197900.1	Wheat	cytosol	44.89	57.59
Zm00001d040483_P001	Maize	cytosol	44.89	56.23
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.29	55.26
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	58.6	55.05
TraesCS6A01G215600.1	Wheat	mitochondrion	58.87	55.03
TraesCS4B01G021600.1	Wheat	cytosol	56.72	52.62
Zm00001d040479_P001	Maize	mitochondrion	56.18	52.51
TraesCS4A01G292500.1	Wheat	cytosol	56.18	52.51
Zm00001d040497_P001	Maize	mitochondrion	55.65	52.27
TraesCS5B01G487700.1	Wheat	cytosol	55.65	52.27
TraesCS6B01G245200.1	Wheat	mitochondrion	47.04	52.08
KXG28549	Sorghum	cytosol	35.48	51.36
HORVU4Hr1G003250.1	Barley	cytosol	56.99	50.6
Zm00001d007717_P001	Maize	mitochondrion, plastid	45.97	49.14
EES08596	Sorghum	cytosol	51.61	46.94
EER99419	Sorghum	cytosol	50.54	46.53
EES08602	Sorghum	cytosol, mitochondrion	50.27	46.17
EES08598	Sorghum	cytosol	49.73	45.79
KXG36274	Sorghum	cytosol	48.39	45.34
EES15184	Sorghum	cytosol	49.46	44.88
OQU85107	Sorghum	cytosol	48.12	44.86
EER99418	Sorghum	cytosol	48.12	44.75
OQU85124	Sorghum	cytosol	47.85	44.61
EES08732	Sorghum	cytosol	48.39	44.55
EES09995	Sorghum	cytosol	48.39	44.55
OQU83574	Sorghum	cytosol	48.39	44.44
EES08603	Sorghum	cytosol, mitochondrion	48.92	43.44
EER95816	Sorghum	cytosol	50.0	43.26
EES15677	Sorghum	cytosol	46.77	42.96
OQU83573	Sorghum	cytosol	39.25	41.24
KXG28544	Sorghum	cytosol	41.4	41.18
OQU83561	Sorghum	cytosol	35.48	41.12
EES09863	Sorghum	cytosol	43.55	40.4
EES09864	Sorghum	cytosol	43.28	40.25
EES14634	Sorghum	cytosol	43.01	40.2
EES08604	Sorghum	cytosol	43.28	40.15
EES09862	Sorghum	cytosol	43.28	40.15
KXG29016	Sorghum	cytosol	43.28	40.15
EES09858	Sorghum	cytosol	43.28	40.15
EES09859	Sorghum	cytosol	43.28	40.15
EES09865	Sorghum	cytosol	43.28	40.15
EES09860	Sorghum	cytosol	43.28	40.15
KXG28978	Sorghum	cytosol	33.33	39.49
OQU83321	Sorghum	cytosol	40.86	37.16
EES09649	Sorghum	cytosol	39.78	36.82
EER98407	Sorghum	cytosol	34.41	30.62
EER91459	Sorghum	cytosol	36.29	27.84
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.23	0.64

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A1W0VWU9	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	EnsemblPlants:OQU86627	ProteinID:OQU86627	ProteinID:OQU86627.1	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF29	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3003G118266
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0009DC8636	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:10693336..10696116

Molecular Weight (calculated)

39956.3 Da

IEP (calculated)

8.338

GRAVY (calculated)

-0.000

Length

372 amino acids

Sequence
(BLAST)

001: MPGRATRCSS LAFRKVRQAQ HANGLASVLS IGTSVPPNCV LRDQYTDYYF GIISQSHHHV GLKKKLHKLC QKTGIKKRYF YHTEEMLRGH PEFLNRASPS
101: LDARMDVMAT AVLELASVAA AKAIADWGRP AAEITHLIVS TYSSGGHMPG ADFRLASLLG LPPSVQRTML YMHGCTSSSA ALRAAKDITE NNSGARILVA
201: SADLITLMLF RAPDDNDTLM MQSMFSDGAG AVVVVGADPV AGEAQAKFEL VSASQVMAPA GKLEGGVGLG QLRHSGLLFH PTISDWNDFF WAVHPGGRAM
301: LDSVEETLEL SPGKLTASRR VLAEYGNMSG PSLIFVLQDL QSSKNGREMG VMLGLGPGLD VEIMVLRATG NY

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.