Factsheet for TraesCS4B01G021600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G292500.1	Wheat	cytosol	90.27	90.95
HORVU4Hr1G003250.1	Barley	cytosol	92.02	88.07
TraesCS6B01G245200.1	Wheat	mitochondrion	64.59	77.08
TraesCS5B01G487700.1	Wheat	cytosol	70.57	71.46
Zm00001d040483_P001	Maize	cytosol	50.87	68.69
Zm00001d040479_P001	Maize	mitochondrion	65.84	66.33
Zm00001d040497_P001	Maize	mitochondrion	64.84	65.66
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.97	63.16
Zm00001d007717_P001	Maize	mitochondrion, plastid	52.62	60.63
TraesCS6B01G327900.1	Wheat	cytosol	48.88	58.68
EES15556	Sorghum	cytosol, mitochondrion	54.86	57.74
TraesCS2B01G072600.1	Wheat	mitochondrion	57.36	57.36
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	55.61	57.33
OQU86627	Sorghum	mitochondrion	52.62	56.72
TraesCS2B01G019200.1	Wheat	cytosol	55.36	55.92
TraesCS2B01G041300.1	Wheat	cytosol	52.87	54.92
TraesCS4B01G357800.1	Wheat	cytosol	40.4	54.36
TraesCS2B01G007000.1	Wheat	cytosol	54.11	54.25
TraesCS4B01G357100.1	Wheat	mitochondrion	43.64	53.19
TraesCS2B01G006800.1	Wheat	cytosol	49.13	52.96
TraesCS2B01G006700.1	Wheat	cytosol	51.62	52.54
TraesCS4B01G357700.1	Wheat	mitochondrion	30.67	51.9
TraesCS2B01G048400.1	Wheat	cytosol	50.87	51.78
TraesCS4B01G357600.1	Wheat	mitochondrion	31.17	51.65
TraesCS2B01G038700.1	Wheat	cytosol	50.62	51.52
TraesCS2B01G006000.1	Wheat	cytosol	50.62	51.52
TraesCS6B01G022300.1	Wheat	cytosol	51.62	51.49
TraesCS2B01G038600.1	Wheat	cytosol	46.38	51.38
TraesCS2B01G613100.1	Wheat	cytosol	50.87	51.13
TraesCS2B01G558400.1	Wheat	cytosol	50.62	51.01
TraesCS6B01G022500.1	Wheat	cytosol	51.12	49.88
TraesCS1B01G040500.1	Wheat	cytosol	49.13	49.37
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	48.63	49.37
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	48.38	49.11
TraesCS1B01G040100.1	Wheat	cytosol	48.13	48.86
TraesCS1B01G041000.1	Wheat	cytosol	48.13	48.86
TraesCS7B01G462200.1	Wheat	cytosol	36.41	48.83
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	48.63	48.51
TraesCS7B01G371700.1	Wheat	plastid	52.37	47.84
TraesCS2B01G006300.1	Wheat	extracellular, golgi	52.12	45.24
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	39.4	40.62
TraesCS1B01G176300.1	Wheat	cytosol	35.66	36.67
TraesCS5B01G003100.1	Wheat	cytosol	36.66	35.08
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.24	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4B01G021600	EnsemblPlants:TraesCS4B01G021600.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4B:-:15596302..15597753

Molecular Weight (calculated)

42847.8 Da

IEP (calculated)

6.791

GRAVY (calculated)

0.073

Length

401 amino acids

Sequence
(BLAST)

001: MVLLGNLTAS PAATGIRQIR QAQRADGPAS VLAIGTANPA NCVRQDDYAD YYFGVINREH LTKLKSKLHR ICKSSAINKR YFHHTEEMLR DHPELIDRTL
101: PSLDTRMAIA ATAVPELAVA AATKAIAEWG RPATDVTHLV VSTYCGAHMP GADLRLASLL GLAPSVPRTM LYLNGCNSGS TALRVAKDIA ENNRGARVLV
201: VCAELTLILL RAPEDEADKA TLIMQALFGD GAGAVIVGAD ANRGSVERPI FEMVATSQTV IPESEHAAAG RLSENGLLFR PAVEMTTLIR ENVEQCLVDA
301: LGPLGLSGGW NRLFWAVHPG GRAILDGVEA VLRLDPEKLA ASRHVLSEFG NMSGPTVIFV LDEIRRRQGE HGVGRDGLGV LLGLGPGISI ETIVLHATGN
401: Y

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.