Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G006800.1 | Wheat | cytosol | 93.15 | 98.66 |
| TraesCS2D01G016100.1 | Wheat | cytosol | 96.95 | 96.95 |
| HORVU2Hr1G002640.1 | Barley | cytosol | 93.65 | 93.65 |
| TraesCS2B01G006000.1 | Wheat | cytosol | 91.12 | 91.12 |
| TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 98.98 | 84.42 |
| TraesCS2A01G014800.1 | Wheat | cytosol | 77.16 | 77.16 |
| TraesCS2B01G019200.1 | Wheat | cytosol | 64.72 | 64.23 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 63.45 | 62.34 |
| TraesCS2B01G007000.1 | Wheat | cytosol | 62.18 | 61.25 |
| TraesCS6B01G327900.1 | Wheat | cytosol | 47.46 | 55.99 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 52.79 | 53.47 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 52.03 | 53.11 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 53.05 | 52.78 |
| TraesCS4B01G357800.1 | Wheat | cytosol | 39.85 | 52.68 |
| TraesCS7B01G371700.1 | Wheat | plastid | 58.12 | 52.16 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 52.54 | 51.62 |
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 31.22 | 50.83 |
| TraesCS4B01G357700.1 | Wheat | mitochondrion | 30.46 | 50.63 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 50.25 | 49.25 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 51.02 | 48.91 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 41.37 | 48.51 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 40.1 | 48.02 |
| TraesCS2B01G038600.1 | Wheat | cytosol | 41.88 | 45.58 |
| TraesCS2B01G048400.1 | Wheat | cytosol | 44.67 | 44.67 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 44.67 | 44.67 |
| TraesCS2B01G613100.1 | Wheat | cytosol | 45.18 | 44.61 |
| TraesCS2B01G558400.1 | Wheat | cytosol | 44.92 | 44.47 |
| TraesCS1B01G041000.1 | Wheat | cytosol | 43.65 | 43.54 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 32.99 | 43.48 |
| TraesCS1B01G040500.1 | Wheat | cytosol | 43.91 | 43.36 |
| TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 43.4 | 43.29 |
| TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 43.15 | 43.04 |
| TraesCS1B01G040100.1 | Wheat | cytosol | 42.89 | 42.78 |
| TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 43.4 | 42.54 |
| TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 38.07 | 38.56 |
| TraesCS1B01G176300.1 | Wheat | cytosol | 35.79 | 36.15 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 35.28 | 33.17 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.55 | 0.74 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF24 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS2B01G006700 | EnsemblPlants:TraesCS2B01G006700.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:4283163..4285479
Molecular Weight (calculated)
42399.9 Da
IEP (calculated)
5.571
GRAVY (calculated)
-0.004
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSSPKVSE IRCAQRAEGS AAMLAIGTAN PANKVSQEEY PDYYFRVTKS EHLTDHKDTF KIICGLTGTE NRFFYHTDEL LNSHPVLLDN TSPSREARHD
101: IVAKAAPELA AAAAKKAIAK WGRPASDITH LIVSTNSDAG APSADVRLVS LLGLRADVCR TMLHLNGCFA GCSALRLAKD LAENNCGARV LVACVELAIS
201: GFCSPGEGDC LDTLITHALF GDGAGAVIVG ANPMHPIENP LFEMVSVSQT LVPSTENVLT LNLGSNGTHG KVYTKLPTLV ADTMEPCLLE VFGPLEMDFQ
301: WNDLFWAVHP GSRGILDQLD KTLQLEPTKL AASRTVVQKF GNMFSATVIF VLDELQRRME EEGEQAEWGA MVGFGPGFTI ETMVLHATGA LKKK
101: IVAKAAPELA AAAAKKAIAK WGRPASDITH LIVSTNSDAG APSADVRLVS LLGLRADVCR TMLHLNGCFA GCSALRLAKD LAENNCGARV LVACVELAIS
201: GFCSPGEGDC LDTLITHALF GDGAGAVIVG ANPMHPIENP LFEMVSVSQT LVPSTENVLT LNLGSNGTHG KVYTKLPTLV ADTMEPCLLE VFGPLEMDFQ
301: WNDLFWAVHP GSRGILDQLD KTLQLEPTKL AASRTVVQKF GNMFSATVIF VLDELQRRME EEGEQAEWGA MVGFGPGFTI ETMVLHATGA LKKK
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.