Factsheet for TraesCS2B01G072600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G051300.1	Wheat	cytosol	90.27	90.27
TraesCS3D01G500500.1	Wheat	cytosol	90.02	90.02
TraesCS2B01G007000.1	Wheat	cytosol	86.53	86.75
TraesCSU01G143400.1	Wheat	cytosol, mitochondrion	83.04	82.63
TraesCSU01G000100.1	Wheat	cytosol, mitochondrion	82.79	82.38
Os07t0526400-01	Rice	cytosol	69.08	69.42
Os07t0525900-00	Rice	cytosol	68.08	68.59
TraesCS2B01G019200.1	Wheat	cytosol	66.83	67.51
TraesCS6B01G327900.1	Wheat	cytosol	53.87	64.67
TraesCS2B01G006800.1	Wheat	cytosol	59.35	63.98
TraesCS2B01G006700.1	Wheat	cytosol	62.34	63.45
TraesCS2B01G006000.1	Wheat	cytosol	62.09	63.2
Os07t0525500-00	Rice	plastid	59.35	60.87
TraesCS7B01G371700.1	Wheat	plastid	65.84	60.14
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	56.86	58.61
TraesCS4B01G021600.1	Wheat	cytosol	57.36	57.36
TraesCS5B01G487700.1	Wheat	cytosol	56.61	57.32
TraesCS2B01G041300.1	Wheat	cytosol	54.11	56.22
TraesCS6B01G245200.1	Wheat	mitochondrion	46.88	55.95
TraesCS2B01G006300.1	Wheat	extracellular, golgi	62.59	54.33
TraesCS4B01G357800.1	Wheat	cytosol	39.9	53.69
TraesCS6B01G022300.1	Wheat	cytosol	52.12	51.99
TraesCS6B01G022500.1	Wheat	cytosol	53.12	51.82
TraesCS4B01G357100.1	Wheat	mitochondrion	41.9	51.06
TraesCS4B01G357600.1	Wheat	mitochondrion	30.67	50.83
TraesCS4B01G357700.1	Wheat	mitochondrion	29.93	50.63
TraesCS2B01G048400.1	Wheat	cytosol	49.63	50.51
TraesCS2B01G613100.1	Wheat	cytosol	50.12	50.38
TraesCS2B01G038600.1	Wheat	cytosol	45.39	50.28
TraesCS2B01G038700.1	Wheat	cytosol	49.38	50.25
TraesCS2B01G558400.1	Wheat	cytosol	49.63	50.0
TraesCS1B01G041000.1	Wheat	cytosol	48.38	49.11
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	48.38	49.11
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	48.13	48.86
TraesCS1B01G040500.1	Wheat	cytosol	48.38	48.62
TraesCS1B01G040100.1	Wheat	cytosol	47.88	48.61
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	48.38	48.26
TraesCS7B01G462200.1	Wheat	cytosol	35.66	47.83
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	40.65	41.9
TraesCS1B01G176300.1	Wheat	cytosol	37.41	38.46
TraesCS5B01G003100.1	Wheat	cytosol	37.41	35.8
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.74	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2B01G072600	EnsemblPlants:TraesCS2B01G072600.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2B:+:38841546..38842840

Molecular Weight (calculated)

43367.1 Da

IEP (calculated)

5.790

GRAVY (calculated)

-0.058

Length

401 amino acids

Sequence
(BLAST)

001: MGSNSLPSVR EIRRSQRADG PAAVLAIGTA NPPNCVSQEE YPDYYFRVAK SQHLTDLKQK LKTFCQMTST EKRYFYHTEE LLDAHPEFLL RDTPSLDARL
101: DIVAAAAPEL AASAAAKAIA EWGRPATDIT HLVVSTNSGA HSPGVDLRLA SLLGLRASVC RTMINLNGCS AGAASLRLAK DLAENNRGAR VLVACVELTI
201: VAFRGPEEAY PHRLISQAAF GDGAGAVIVG ADAVQPVERP LFEMVSASQT IIPGTDGVLT MQLTEAGLDG HIFTRELIPL AGQHVEQCLT DAFQPLGIMS
301: DGTKWNDMFF VVHPGIRGIM DHIDGALRLD PGKLAASRTV LREYGNMLGA TLIFVLDEQR RRMEEEGERT GEWGVMMGFG PGFTVETMVL HAVASNLDKK
401: N

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.