CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86627	Sorghum	mitochondrion	73.75	75.54
TraesCS6D01G197900.1	Wheat	cytosol	45.93	60.34
TraesCS6A01G215600.1	Wheat	mitochondrion	61.42	58.79
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	60.89	58.59
Zm00001d040483_P001	Maize	cytosol	45.14	57.91
TraesCS6B01G245200.1	Wheat	mitochondrion	50.66	57.44
Zm00001d040479_P001	Maize	mitochondrion	58.53	56.03
TraesCS4A01G292500.1	Wheat	cytosol	58.53	56.03
Zm00001d040497_P001	Maize	mitochondrion	57.22	55.05
TraesCS5B01G487700.1	Wheat	cytosol	57.22	55.05
TraesCS4B01G021600.1	Wheat	cytosol	57.74	54.86
HORVU4Hr1G003250.1	Barley	cytosol	59.32	53.94
Zm00001d007717_P001	Maize	mitochondrion, plastid	48.03	52.59
KXG28549	Sorghum	cytosol	35.43	52.53
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.24	51.32
EES08596	Sorghum	cytosol	53.28	49.63
EER99419	Sorghum	cytosol	52.49	49.51
EES08602	Sorghum	cytosol, mitochondrion	51.44	48.4
EES08598	Sorghum	cytosol	50.92	48.02
OQU83574	Sorghum	cytosol	50.92	47.9
EES08603	Sorghum	cytosol, mitochondrion	51.71	47.02
KXG36274	Sorghum	cytosol	48.56	46.6
EER99418	Sorghum	cytosol	48.82	46.5
OQU85107	Sorghum	cytosol	48.56	46.37
OQU85124	Sorghum	cytosol	48.29	46.12
EES15184	Sorghum	cytosol	49.34	45.85
EES08732	Sorghum	cytosol	47.77	45.05
EES09995	Sorghum	cytosol	47.77	45.05
EES14634	Sorghum	cytosol	45.93	43.97
EER95816	Sorghum	cytosol	49.61	43.95
OQU83561	Sorghum	cytosol	37.01	43.93
EES15677	Sorghum	cytosol	46.46	43.7
EES09863	Sorghum	cytosol	45.41	43.14
EES09864	Sorghum	cytosol	45.14	43.0
KXG28978	Sorghum	cytosol	35.43	42.99
KXG29016	Sorghum	cytosol	45.14	42.89
EES09858	Sorghum	cytosol	45.14	42.89
EES09859	Sorghum	cytosol	45.14	42.89
EES09860	Sorghum	cytosol	45.14	42.89
EES09862	Sorghum	cytosol	45.14	42.89
EES09865	Sorghum	cytosol	45.14	42.89
EES08604	Sorghum	cytosol	45.14	42.89
KXG28544	Sorghum	cytosol	41.21	41.98
OQU83573	Sorghum	cytosol	38.85	41.81
EES09649	Sorghum	cytosol	40.16	38.06
OQU83321	Sorghum	cytosol	39.9	37.16
EER98407	Sorghum	cytosol	34.12	31.1
EER91459	Sorghum	cytosol	35.17	27.63
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.67	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:C5YQK0	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	EnsemblPlants:EES15556
ProteinID:EES15556	ProteinID:EES15556.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF29	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3008G013500
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000B8BAF14	RefSeq:XP_002441718.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:1139930..1141214

Molecular Weight (calculated)

41052.5 Da

IEP (calculated)

6.741

GRAVY (calculated)

-0.018

Length

381 amino acids

Sequence
(BLAST)

001: MMLGNQMVSP AVAFSKVRQT QRADGLASVL SIGTAVPPNC VLQEEYADYY FHVTQTLHHR IGLKEKLHKL CQNTGIKKRY FYHTEEMIQG HPEFLNRASP
101: SLDARMDILA TAVPELASAA AAKAIAEWGR PAAEITHLIV STYSSGGHMP GADFRLATLL GLPSSVQRTM LYMYGCTGTS AALRAAKDIA ENNGGARVLV
201: ACADLTLMLF RAPDEARNET LKMQSMFSDG AGAVVVGAEA QPKFELVSAS QAMAPAGELD GGVGQLRENG LLFHPSRNIP AVIHENLERW VSDAVAPLGI
301: SPSDWNELFF AVQPGGRAML DSLAASRRVL AEYGNMSGPS LVFVLQELQR SKTDREIGVM LGLGPGLDVE AMVLRATGKH Y

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.