Factsheet for Zm00001d007400_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040483_P001	Maize	cytosol	36.43	51.52
Zm00001d000438_P001	Maize	cytosol, mitochondrion	48.1	50.25
Zm00001d021562_P001	Maize	cytosol, mitochondrion	48.1	50.25
Zm00001d040497_P001	Maize	mitochondrion	46.9	49.75
Zm00001d040479_P001	Maize	mitochondrion	46.43	48.99
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	45.24	47.86
Zm00001d007717_P001	Maize	mitochondrion, plastid	35.24	42.53
Zm00001d052676_P001	Maize	plastid	47.14	41.95
Zm00001d007403_P001	Maize	cytosol	38.57	40.4
Zm00001d052673_P001	Maize	cytosol	38.33	40.25
Zm00001d032662_P001	Maize	plastid	32.38	34.87
Zm00001d052916_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	55.48	34.37
Zm00001d019478_P001	Maize	cytosol	31.67	31.89
Zm00001d013991_P001	Maize	mitochondrion	31.9	31.83
Zm00001d052675_P002	Maize	plastid	49.05	27.95
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.86	0.64

Protein Annotations

EntrezGene:103648034	Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A1D6F615	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	ProteinID:ONM26714.1	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF45	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI0002218BA0	EnsemblPlantsGene:Zm00001d007400	EnsemblPlants:Zm00001d007400_P001	EnsemblPlants:Zm00001d007400_T001	SEG:seg	:

Description

Type III polyketide synthase B

Coordinates

chr2:-:230846790..230848177

Molecular Weight (calculated)

44139.1 Da

IEP (calculated)

6.229

GRAVY (calculated)

0.152

Length

420 amino acids

Sequence
(BLAST)

001: MQSSLLARDS NHAAAATCPS GDGLACVLGV GTANPANCVQ QDEYTDRYFR ITNSDHLTHI KPIMKRACEM TGVKKRYVQV DEDLLREHPE FLDPGAASLP
101: SRLAVVAAAM PGLVAAAAAK AIAEWGRPAT DITHLVFSTS TSVQVPAVDL RVASLLGLPP TVRRTTLCSH ACTGSSGALR VAKDVAETSR GARVLVACAD
201: MLSVLGVHAP HDDDDDAVGI VAHALFGDGA GAVLVGADPW DPRERPIFQM LAASQATVPG TDHVVALELA SAGVAYRIEA GELAALVGAN VERCLSDAMA
301: PLAAVGCVGA WNDLFWVLHP GGPIIMDSFA AALGLQPGKL AASRRVLSEY GNMMGPTLIF VLDEVIRRRR QNHQDRSCGW GFMVGLGPGF TIEVMALRAC
401: GDIDNDKSTL PPTPRLKSSL

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.