Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83573 | Sorghum | cytosol | 39.53 | 75.71 |
| KXG28544 | Sorghum | cytosol | 40.56 | 73.53 |
| Zm00001d007400_P001 | Maize | cytosol | 34.37 | 55.48 |
| Zm00001d040483_P001 | Maize | cytosol | 22.42 | 51.18 |
| Zm00001d000438_P001 | Maize | cytosol, mitochondrion | 25.81 | 43.53 |
| Zm00001d021562_P001 | Maize | cytosol, mitochondrion | 25.81 | 43.53 |
| Zm00001d040497_P001 | Maize | mitochondrion | 24.19 | 41.41 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 24.19 | 41.31 |
| Zm00001d040479_P001 | Maize | mitochondrion | 23.89 | 40.7 |
| Zm00001d052676_P001 | Maize | plastid | 25.07 | 36.02 |
| Zm00001d007403_P001 | Maize | cytosol | 21.09 | 35.66 |
| Zm00001d052673_P001 | Maize | cytosol | 20.94 | 35.5 |
| Zm00001d007717_P001 | Maize | mitochondrion, plastid | 17.4 | 33.91 |
| Zm00001d032662_P001 | Maize | plastid | 18.88 | 32.82 |
| Zm00001d013991_P001 | Maize | mitochondrion | 18.29 | 29.45 |
| Zm00001d019478_P001 | Maize | cytosol | 17.26 | 28.06 |
| Zm00001d052675_P002 | Maize | plastid | 24.04 | 22.12 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 1.62 | 0.58 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | UniProt:A0A1D6QKV3 | ProteinID:AQK58341.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 | PANTHER:PTHR11877 |
| PANTHER:PTHR11877:SF45 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI00084534F6 | EnsemblPlantsGene:Zm00001d052916 |
| EnsemblPlants:Zm00001d052916_P001 | EnsemblPlants:Zm00001d052916_T001 | SEG:seg | : | : | : |
Description
Chalcone synthase 8
Coordinates
chr4:-:204719770..204725360
Molecular Weight (calculated)
72606.8 Da
IEP (calculated)
5.962
GRAVY (calculated)
0.151
Length
678 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCEKMMVKK RYLQVNEELF REHPEFLDPA APSLEGKLAV VASVMPGLVA AAAEKAIAEW GRPAEDITHL VFATSSSAQL PHIDLRIASL LGLSTTVQRT
101: VIGFHGCSGS SAALRVAKDI AENNRSARVL VACADMLSVM DGYLVPNVVA HRYGIIGHAI FGDGAGAVVV GSRPQEPVER PIFEMVSASQ ATLPGSELAV
201: AAELTNFGME YRLEFGELAA GVGDNIERCL IDALSPLGIG SVGWNNLFWA VHPGGPKVMD NFTAALRLEP GKLAPSRQVF SEYGNMVGPT LIFVLDEVIR
301: RRQQDHEEGS CEWGFMVGFG PGFTIDVMAL HACSGEKMMV KKRYLQVNEE LFSVHPEFLD PAAPSLQGKL AVVAGAMPGL VAAAAEKAIA DWGRPAGDIT
401: HLVFATSSSA QLPHIDLRIA ALLGLSTTVQ RTVIGFHACS GSSAALRVAK YIAENNRSAR VLVACADMWS VMDSYVVPNV DHRYGIIGHA FIGDGAGAVV
501: VGSRPQEPVE RPIFEMVSAS QATVPGSERA VAVELTNCGL EYRLEFGDVA AEVGGNIERC LLDALSPLGI GSVGWNNLFW VVHPGGPRIM DTFTAALKLQ
601: PEKLSASRRV LREYGNMTGP TLIFVLDEAI RRRQLDHEEG SCEWGLMVGL GPGFTIDVMA LRACSGKSTP TPRIKSSL
101: VIGFHGCSGS SAALRVAKDI AENNRSARVL VACADMLSVM DGYLVPNVVA HRYGIIGHAI FGDGAGAVVV GSRPQEPVER PIFEMVSASQ ATLPGSELAV
201: AAELTNFGME YRLEFGELAA GVGDNIERCL IDALSPLGIG SVGWNNLFWA VHPGGPKVMD NFTAALRLEP GKLAPSRQVF SEYGNMVGPT LIFVLDEVIR
301: RRQQDHEEGS CEWGFMVGFG PGFTIDVMAL HACSGEKMMV KKRYLQVNEE LFSVHPEFLD PAAPSLQGKL AVVAGAMPGL VAAAAEKAIA DWGRPAGDIT
401: HLVFATSSSA QLPHIDLRIA ALLGLSTTVQ RTVIGFHACS GSSAALRVAK YIAENNRSAR VLVACADMWS VMDSYVVPNV DHRYGIIGHA FIGDGAGAVV
501: VGSRPQEPVE RPIFEMVSAS QATVPGSERA VAVELTNCGL EYRLEFGDVA AEVGGNIERC LLDALSPLGI GSVGWNNLFW VVHPGGPRIM DTFTAALKLQ
601: PEKLSASRRV LREYGNMTGP TLIFVLDEAI RRRQLDHEEG SCEWGLMVGL GPGFTIDVMA LRACSGKSTP TPRIKSSL
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.