Factsheet for Zm00001d011438_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007403_P001
Zm00001d012972_P001
Zm00001d018181_P001
Zm00001d018184_P001
Zm00001d034635_P001
Zm00001d052673_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42800.1	Zm00001d012972_P001	AT3G55120.1	10536025
AT5G42800.1	Zm00001d034635_P001	AT3G55120.1	10536025
AT5G42800.1	Zm00001d018181_P001	AT5G08640.1	18467451
AT5G42800.1	Zm00001d018184_P001	AT5G08640.1	18467451
AT5G42800.1	Zm00001d007403_P001	AT5G13930.1	10536025
AT5G42800.1	Zm00001d052673_P001	AT5G13930.1	10536025
AT5G42800.1	Zm00001d007403_P001	AT5G13930.1	21669202
AT5G42800.1	Zm00001d052673_P001	AT5G13930.1	21669202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01135	Sorghum	cytosol	85.6	88.29
Zm00001d044122_P001	Maize	plastid	81.16	82.07
TraesCS3D01G224600.1	Wheat	cytosol, extracellular, plastid	75.9	77.4
HORVU3Hr1G056560.2	Barley	cytosol	74.79	76.27
TraesCS3A01G226600.1	Wheat	nucleus	74.79	76.27
TraesCS3B01G257900.2	Wheat	plastid	76.45	71.5
Os01t0633500-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	61.5	70.03
GSMUA_Achr3P31110_001	Banana	cytosol, endoplasmic reticulum, plastid	65.93	66.85
GSMUA_Achr4P10640_001	Banana	cytosol	63.43	65.06
KRH15169	Soybean	plastid	60.39	62.64
KRH05848	Soybean	plastid	60.11	61.3
VIT_04s0023g02090.t01	Wine grape	cytosol	26.32	59.01
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	60.66	58.4
KRH71611	Soybean	nucleus	53.19	56.64
AT5G42800.1	Thale cress	cytosol	57.34	54.19
CDY52372	Canola	cytosol	57.34	53.77
Bra027457.1-P	Field mustard	cytosol	57.34	53.77
CDX95155	Canola	cytosol	56.79	53.25
PGSC0003DMT400009287	Potato	cytosol	55.68	52.62
Solyc02g085020.2.1	Tomato	cytosol	55.12	52.51
KRH05851	Soybean	extracellular	16.9	49.19
CDY21246	Canola	cytosol	32.69	48.36
Zm00001d026370_P001	Maize	mitochondrion	35.18	37.03
Zm00001d042594_P001	Maize	cytosol	18.01	36.72
Zm00001d026371_P001	Maize	cytosol	33.52	35.07
Zm00001d014481_P001	Maize	cytosol	35.46	33.68
Zm00001d026369_P003	Maize	cytosol	34.07	33.52
Zm00001d022060_P001	Maize	mitochondrion	29.36	30.2
Zm00001d031802_P001	Maize	plastid	29.36	27.89
Zm00001d046811_P001	Maize	plastid	26.04	26.04

Protein Annotations

EMBL:BT039921	EnsemblPlants:Zm00001d011438_P001	EnsemblPlants:Zm00001d011438_T001	EnsemblPlantsGene:Zm00001d011438	EntrezGene:100272982	Gene3D:3.40.50.720
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	PFAM:PF01370	ProteinID:AQK96914.1	SEG:seg	SUPFAM:SSF51735
TMHMM:TMhelix	UniParc:UPI00017B7D9B	UniProt:B4FS33	MapMan:9.2.2.9.1	:	:

Description

anthocyaninless4Dihydroflavonol-4-reductase

Coordinates

chr8:+:150482983..150484456

Molecular Weight (calculated)

39540.5 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.067

Length

361 amino acids

Sequence
(BLAST)

001: MRDVVAKREA MKGGASSKGP VVVTGASGFV GSWLVMKLLQ AGYTVRATVR DPENVGKTKP LLDLPGATER LSIWKADLAD EDSFDEAIRG CTGVFHVATP
101: TDFESKDPEN EVIKPTVEGM IRILRACKEA GTVRRIVFTS SAGTVCVEER QRPVYDHDNW SDVDFCRRVK MTGWMYFVSK SLAEKAAVAY AAEHGLDLVS
201: VIPTLVVGPF LSAAMPPSLV TALALVTGNE AHYSILKQVQ FVHLDDLCDA EIFLFEHPAA AGRYVCSSHD ATIHGLAAML RDRYPEYDIP QKLRGIEDEL
301: QLVHFSSKKL LDHGFTFRYT VEDMFDAGIR TCREKGLIPL ATAGGVGSAS LRTPGETARR M

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.