Factsheet for Os01t0633500-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 4
plastid 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 15069638
plasma membrane: 15069638
plastid: 15069638

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0767300-01
Os03t0819600-01
Os07t0214900-00
Os11t0530600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42800.1	Os03t0819600-01	AT3G55120.1	10536025
AT5G42800.1	Os02t0767300-01	AT5G08640.1	18467451
AT5G42800.1	Os07t0214900-00	AT5G13930.1	10536025
AT5G42800.1	Os11t0530600-01	AT5G13930.1	10536025
AT5G42800.1	Os07t0214900-00	AT5G13930.1	21669202
AT5G42800.1	Os11t0530600-01	AT5G13930.1	21669202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G224600.1	Wheat	cytosol, extracellular, plastid	74.13	66.38
TraesCS3A01G226600.1	Wheat	nucleus	73.5	65.82
HORVU3Hr1G056560.2	Barley	cytosol	71.92	64.41
EES01135	Sorghum	cytosol	70.98	64.29
Zm00001d011438_P001	Maize	extracellular	70.03	61.5
Zm00001d044122_P001	Maize	plastid	68.77	61.06
EES04562	Sorghum	plastid	69.09	60.5
TraesCS3B01G257900.2	Wheat	plastid	73.5	60.36
EES19023	Sorghum	cytosol, peroxisome, plastid	68.45	59.94
VIT_04s0023g02090.t01	Wine grape	cytosol	29.02	57.14
EES01136	Sorghum	plastid	67.19	54.76
GSMUA_Achr3P31110_001	Banana	cytosol, endoplasmic reticulum, plastid	60.88	54.21
KRH15169	Soybean	plastid	57.73	52.59
GSMUA_Achr4P10640_001	Banana	cytosol	58.04	52.27
KRH05848	Soybean	plastid	56.47	50.56
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	58.68	49.6
KRH71611	Soybean	nucleus	50.47	47.2
KRH05851	Soybean	extracellular	18.3	46.77
AT5G42800.1	Thale cress	cytosol	55.84	46.34
Bra027457.1-P	Field mustard	cytosol	55.52	45.71
CDY52372	Canola	cytosol	55.52	45.71
Solyc02g085020.2.1	Tomato	cytosol	53.94	45.12
PGSC0003DMT400009287	Potato	cytosol	54.26	45.03
CDX95155	Canola	cytosol	54.57	44.94
CDY21246	Canola	cytosol	27.44	35.66
Os04t0630800-01	Rice	cytosol	34.7	31.98
Os04t0631000-00	Rice	cytosol	33.12	31.25
Os04t0630400-01	Rice	cytosol	33.44	30.64
Os04t0630300-01	Rice	plastid	31.86	29.19
Os04t0630600-00	Rice	plasma membrane	32.49	28.85
Os06t0683100-01	Rice	cytosol	30.6	26.43
Os04t0630100-01	Rice	cytosol	23.97	23.68
Os07t0601000-01	Rice	golgi	23.66	22.19
Os04t0630900-01	Rice	cytosol	17.67	21.96
Os07t0602000-01	Rice	mitochondrion, peroxisome, plastid	23.34	21.76
Os07t0598000-02	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	23.34	21.7
Os10t0477900-00	Rice	cytosol	22.08	21.54
Os07t0601100-01	Rice	mitochondrion	22.08	20.9
Os06t0651100-01	Rice	cytosol	23.03	20.39
Os07t0602050-00	Rice	cytosol	18.3	16.71
Os06t0651000-01	Rice	cytosol	10.41	16.67
Os07t0601900-01	Rice	plastid	10.73	15.18

Protein Annotations

EnsemblPlants:Os01t0633500-00	EnsemblPlantsGene:Os01g0633500	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	PFAM:PF01370
ProteinID:BAS73318.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0003939AAD	UniProt:A0A0P0V5N7	MapMan:9.2.2.9.1

Description

RED PERICARP AND SEED COATSimilar to Dihydroflavonol reductase. (Os01t0633500-00)

Coordinates

chr1:+:25382714..25384678

Molecular Weight (calculated)

34778.4 Da

IEP (calculated)

4.909

GRAVY (calculated)

-0.146

Length

317 amino acids

Sequence
(BLAST)

001: KERLTLWKAD LGEEGSFDAA IRGCTGVFHV ATPMDFESED PENEVVKPTV EGMLSIMRAC RDAGTVKRIV FTSSAGTVNI EERQRPSYDH DDWSDIDFCR
101: RVKMTGWMYF VSKSLAEKAA MEYAREHGLD LISVIPTLVV GPFISNGMPP SHVTALALLT GNEAHYSILK QVQFVHLDDL CDAEIFLFES PEARGRYVCS
201: SHDATIHGLA TMLADMFPEY DVPRSFPGID ADHLQPVHFS SWKLLAHGFR FRYTLEDMFE AAVRTCREKG LLPPLPPPPT TAVAGGDGSA GVAGEKEPIL
301: GRGTGTAVGA ETEALVK

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.