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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 4
  • plastid 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90629
EES00073
EES07584
EES08604
EES09858
EES09859
EES09860
EES09862
EES09863
EES09864
EES09865
EES14634
KXG29016

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42800.1 EER90629 AT3G55120.1 10536025
AT5G42800.1 EES00073 AT5G08640.1 18467451
AT5G42800.1 EES07584 AT5G08640.1 18467451
AT5G42800.1 EES08604 AT5G13930.1 10536025
AT5G42800.1 EES09858 AT5G13930.1 10536025
AT5G42800.1 EES09859 AT5G13930.1 10536025
AT5G42800.1 EES09860 AT5G13930.1 10536025
AT5G42800.1 EES09862 AT5G13930.1 10536025
AT5G42800.1 EES09863 AT5G13930.1 10536025
AT5G42800.1 EES09864 AT5G13930.1 10536025
AT5G42800.1 EES09865 AT5G13930.1 10536025
AT5G42800.1 EES14634 AT5G13930.1 10536025
AT5G42800.1 KXG29016 AT5G13930.1 10536025
AT5G42800.1 EES08604 AT5G13930.1 21669202
AT5G42800.1 EES09858 AT5G13930.1 21669202
AT5G42800.1 EES09859 AT5G13930.1 21669202
AT5G42800.1 EES09860 AT5G13930.1 21669202
AT5G42800.1 EES09862 AT5G13930.1 21669202
AT5G42800.1 EES09863 AT5G13930.1 21669202
AT5G42800.1 EES09864 AT5G13930.1 21669202
AT5G42800.1 EES09865 AT5G13930.1 21669202
AT5G42800.1 EES14634 AT5G13930.1 21669202
AT5G42800.1 KXG29016 AT5G13930.1 21669202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01135 Sorghum cytosol 78.41 87.14
EES19023 Sorghum cytosol, peroxisome, plastid 80.46 86.46
Zm00001d044122_P001 Maize plastid 77.12 84.03
EES04562 Sorghum plastid 77.89 83.7
TraesCS3D01G224600.1 Wheat cytosol, extracellular, plastid 68.64 75.42
TraesCS3A01G226600.1 Wheat nucleus 68.12 74.86
HORVU3Hr1G056560.2 Barley cytosol 67.35 74.01
TraesCS3B01G257900.2 Wheat plastid 69.15 69.69
Os01t0633500-00 Rice cytosol, mitochondrion, plasma membrane, plastid 54.76 67.19
GSMUA_Achr3P31110_001 Banana cytosol, endoplasmic reticulum, plastid 61.18 66.85
GSMUA_Achr4P10640_001 Banana cytosol 59.9 66.19
KRH15169 Soybean plastid 57.58 64.37
KRH05848 Soybean plastid 55.78 61.3
KRH71611 Soybean nucleus 52.96 60.77
VIT_04s0023g02090.t01 Wine grape cytosol 24.94 60.25
VIT_18s0001g12800.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane, plastid 57.33 59.47
Bra027457.1-P Field mustard cytosol 54.24 54.81
CDY52372 Canola cytosol 54.24 54.81
AT5G42800.1 Thale cress cytosol 53.47 54.45
CDX95155 Canola cytosol 53.47 54.03
PGSC0003DMT400009287 Potato cytosol 51.93 52.88
Solyc02g085020.2.1 Tomato cytosol 51.41 52.77
KRH05851 Soybean extracellular 16.45 51.61
CDY21246 Canola cytosol 31.88 50.82
EES11487 Sorghum mitochondrion 34.96 39.88
KXG27183 Sorghum cytosol 34.19 39.0
EES11482 Sorghum cytosol, mitochondrion, plastid 34.19 38.66
OQU82391 Sorghum cytosol, mitochondrion 31.62 38.56
EES11485 Sorghum mitochondrion 33.68 38.53
KXG27176 Sorghum cytosol, mitochondrion, plastid 33.42 37.68
KXG27184 Sorghum cytosol 32.39 36.73
KXG27182 Sorghum cytosol 32.13 36.13
EES11483 Sorghum cytosol 32.13 36.13
KXG27175 Sorghum cytosol 31.62 35.86
OQU76902 Sorghum cytosol 34.45 34.45
OQU82393 Sorghum plastid 33.68 33.76
OQU90211 Sorghum cytosol 28.53 32.55
EES14013 Sorghum cytosol 28.28 30.99
EER88741 Sorghum peroxisome 27.76 30.42
OQU76794 Sorghum cytosol, peroxisome, plastid 22.62 28.03
KXG36638 Sorghum mitochondrion 28.28 27.78
Protein Annotations
EnsemblPlants:EES01136EnsemblPlantsGene:SORBI_3003G231000EntrezGene:8058203Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF276
PFAM:PF01370ProteinID:EES01136ProteinID:EES01136.1RefSeq:XP_002456016.1SEG:segSUPFAM:SSF51735
UniParc:UPI0001A84401UniProt:C5XEH3MapMan:9.2.2.9.1:::
Description
hypothetical protein
Coordinates
chr3:+:57040606..57042555
Molecular Weight (calculated)
42117.5 Da
IEP (calculated)
4.871
GRAVY (calculated)
-0.021
Length
389 amino acids
Sequence
(BLAST)
001: MAEVVTTPAA MNGGASVKGP VVVTGASGFV GSWLVMKLLQ AGYTVRATVR DPANVVKTKP LLDLPGATER LSLWKADLAV EGSFDDAIRG CTGVFHVATP
101: MDFESKDPEN EVIKPTVEGM ISIMRACKEA GTVRRIVFTS SAGTCNIEEW RKPVYDEDNW TDVDFCRRVK MTGWMYFVSK TLAEKAALAY AAEHGMELVT
201: IITTLVVGPF LSTGMPPSMI TALALVTGNE AHYSILKQVQ FVHLDDLCDA HIFLFEHPAA AGRYVCSSCD TTIHDLAAML RDRYPEYDIP ERFPAGTGIE
301: DDLQMVHMSA KKLQDLGFTF RYTRMEDMYD DAIRTCREKG LIPLAAAGRD DGSASVRAPG ERDVTATAGG DVSAPVRAPG GETDVTIGA
Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.