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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
PProwler:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES11485 Sorghum mitochondrion 60.57 69.12
KXG27183 Sorghum cytosol 59.02 67.16
EES11487 Sorghum mitochondrion 57.47 65.4
KXG27176 Sorghum cytosol, mitochondrion, plastid 57.99 65.22
TraesCS2A01G481200.1 Wheat cytosol, mitochondrion, plastid 57.47 65.2
TraesCS2D01G481500.1 Wheat mitochondrion 57.22 64.91
EES11483 Sorghum cytosol 57.47 64.45
KXG27184 Sorghum cytosol 56.96 64.43
OQU82391 Sorghum cytosol, mitochondrion 51.55 62.7
TraesCS2B01G507600.1 Wheat cytosol 55.41 62.68
KXG27182 Sorghum cytosol 55.67 62.43
TraesCS2A01G481300.1 Wheat mitochondrion 55.15 62.39
KXG27175 Sorghum cytosol 54.38 61.52
EES11482 Sorghum cytosol, mitochondrion, plastid 54.12 61.05
TraesCS2D01G481600.1 Wheat cytosol, mitochondrion, plastid 53.87 60.93
TraesCS2B01G612700.1 Wheat cytosol 53.61 60.82
TraesCS2B01G612800.1 Wheat cytosol 53.61 60.82
TraesCS2D01G481700.1 Wheat cytosol 53.35 60.7
TraesCS2B01G507700.1 Wheat cytosol 53.09 59.88
HORVU2Hr1G108180.1 Barley cytosol 52.58 59.65
TraesCS2D01G483100.1 Wheat cytosol 51.03 59.46
TraesCS2B01G507500.1 Wheat mitochondrion 52.32 59.36
TraesCS2D01G598900.1 Wheat cytosol 42.27 58.78
Os04t0630300-01 Rice plastid 52.32 58.67
TraesCS2A01G579400.1 Wheat cytosol 51.55 58.31
TraesCS2A01G579300.1 Wheat cytosol 51.55 58.31
TraesCS2A01G579500.1 Wheat cytosol 51.29 58.02
TraesCS2A01G579200.1 Wheat cytosol 51.29 58.02
TraesCS2B01G606800.1 Wheat cytosol 51.55 57.97
TraesCS2A01G579600.1 Wheat cytosol 51.03 57.73
TraesCS2A01G483100.1 Wheat cytosol 45.88 57.05
TraesCS2B01G507300.1 Wheat mitochondrion 32.99 56.39
TraesCS2B01G055100.1 Wheat cytosol 50.26 55.56
HORVU2Hr1G123890.5 Barley cytosol 50.26 54.78
Os04t0630400-01 Rice cytosol 48.71 54.62
TraesCS2A01G481400.1 Wheat mitochondrion 30.93 52.4
Os04t0630100-01 Rice cytosol 41.24 49.84
GSMUA_Achr8P01490_001 Banana cytosol 43.81 48.16
VIT_00s0361g00040.t01 Wine grape endoplasmic reticulum, extracellular, golgi 38.92 44.67
Solyc03g031470.2.1 Tomato golgi 37.37 43.41
KRH41990 Soybean cytosol, extracellular 37.37 43.03
AT1G61720.1 Thale cress cytosol 37.37 42.65
PGSC0003DMT400013000 Potato extracellular 37.11 42.6
Bra021318.1-P Field mustard cytosol 37.37 42.03
CDY32381 Canola cytosol 37.37 42.03
CDY07276 Canola cytosol 36.86 41.81
KRH41993 Soybean golgi 35.05 40.24
Bra031403.1-P Field mustard cytosol 34.79 39.94
CDY52321 Canola cytosol 34.79 39.94
CDY25313 Canola cytosol 34.54 39.65
EES01135 Sorghum cytosol 32.99 36.57
EES04562 Sorghum plastid 33.76 36.19
EES19023 Sorghum cytosol, peroxisome, plastid 32.22 34.53
EES01136 Sorghum plastid 33.76 33.68
OQU76902 Sorghum cytosol 31.7 31.62
OQU90211 Sorghum cytosol 25.26 28.74
EER88741 Sorghum peroxisome 24.74 27.04
EES14013 Sorghum cytosol 24.48 26.76
KXG36638 Sorghum mitochondrion 25.77 25.25
OQU76794 Sorghum cytosol, peroxisome, plastid 19.85 24.52
Protein Annotations
EnsemblPlants:OQU82393EnsemblPlantsGene:SORBI_3006G227800Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF288PFAM:PF01370
ProteinID:OQU82393ProteinID:OQU82393.1SEG:segSUPFAM:SSF51735UniParc:UPI000B8B986DUniProt:A0A1Z5RF54
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr6:+:57246053..57249846
Molecular Weight (calculated)
42106.3 Da
IEP (calculated)
6.580
GRAVY (calculated)
-0.031
Length
388 amino acids
Sequence
(BLAST)
001: MSASMPAGAG AASASKGRKK TACVTGGNGY IASALVKMLL DKGYAVKTTV RNPDDMDKNS HLIMELQSLG HLEVFRADLD EEGSFDDAVA GCDYAFLVAA
101: PVNLTSENPE TEQIEPTVRA TLNVMRSCLK AGTVRRVVLT SAASTICIRP LEGDGHVLDE HSWSDLDYVT AERPPAWGYV ISKVLSEKEA FRFAQEHGIS
201: LAIVCPVLTV GASPAREAYA SVRASLSMLS GDEAALAMLK GIEKSFGAVP VVHLHDLCRA EVFLAETATA APGRYICSSV STTVVEIARF LADKYTQYHV
301: DIKQSSDDEL LEKPRVSLSS AKLVKEGFQF KYSTLDAIYG DVIQCARFSC STTGPRLFRA QQRHRSIQIH SLVNLHRFVV VEQEQIRG
Best Arabidopsis Sequence Match ( AT1G09510.1 )
(BLAST)
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.