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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031802_P001 Maize plastid 89.01 83.16
EER88741 Sorghum peroxisome 80.85 80.85
HORVU7Hr1G030830.1 Barley cytosol 37.75 71.28
Os06t0651000-01 Rice cytosol 39.15 70.2
TraesCS7A01G505200.1 Wheat peroxisome 70.42 69.44
TraesCS7D01G152300.1 Wheat cytosol, peroxisome, plastid 66.76 66.95
TraesCS7A01G505300.1 Wheat cytosol 49.58 66.17
TraesCS7B01G412700.1 Wheat plastid 70.42 64.1
OQU90211 Sorghum cytosol 53.52 55.72
OQU76794 Sorghum cytosol, peroxisome, plastid 48.17 54.46
Solyc10g009500.2.1 Tomato cytosol 26.76 51.08
GSMUA_AchrUn_... Banana cytosol 17.75 50.81
Solyc04g015590.2.1 Tomato cytosol 23.38 46.89
KXG36638 Sorghum mitochondrion 51.83 46.46
KRH30756 Soybean plastid 17.46 46.27
KRG97147 Soybean cytosol, nucleus 43.38 45.29
VIT_02s0025g01260.t01 Wine grape plastid 43.38 45.03
VIT_15s0046g01160.t01 Wine grape mitochondrion 42.82 44.84
PGSC0003DMT400051197 Potato cytosol 41.41 43.75
PGSC0003DMT400051196 Potato cytosol 37.46 43.61
VIT_15s0046g01150.t01 Wine grape cytosol 29.3 42.8
KRH68896 Soybean cytosol 41.41 42.73
VIT_15s0046g01170.t01 Wine grape cytosol 41.41 42.12
KRG97148 Soybean cytosol 39.15 40.41
Solyc10g009540.1.1 Tomato cytosol 30.14 40.38
Solyc10g009520.2.1 Tomato mitochondrion 23.1 36.61
Solyc10g009510.1.1 Tomato cytosol 9.3 34.38
EES11482 Sorghum cytosol, mitochondrion, plastid 30.99 31.98
OQU82391 Sorghum cytosol, mitochondrion 28.45 31.66
EES11485 Sorghum mitochondrion 30.14 31.47
KXG27183 Sorghum cytosol 30.14 31.38
KXG27182 Sorghum cytosol 29.58 30.35
EES11487 Sorghum mitochondrion 29.01 30.21
EES04562 Sorghum plastid 30.14 29.56
KXG27184 Sorghum cytosol 28.45 29.45
EES01135 Sorghum cytosol 29.01 29.43
KXG27176 Sorghum cytosol, mitochondrion, plastid 28.45 29.28
EES11483 Sorghum cytosol 27.61 28.32
EES01136 Sorghum plastid 30.99 28.28
EES19023 Sorghum cytosol, peroxisome, plastid 28.73 28.18
KXG27175 Sorghum cytosol 25.92 26.82
OQU76902 Sorghum cytosol 28.73 26.22
OQU82393 Sorghum plastid 26.76 24.48
Protein Annotations
EnsemblPlants:EES14013EnsemblPlantsGene:SORBI_3007G157700EntrezGene:8083550Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF339
PFAM:PF01370ProteinID:EES14013ProteinID:EES14013.1RefSeq:XP_002444518.1SEG:segSUPFAM:SSF51735
UniParc:UPI0001A87AD5UniProt:C5YMC3MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr7:+:59193179..59197076
Molecular Weight (calculated)
38477.1 Da
IEP (calculated)
5.455
GRAVY (calculated)
0.065
Length
355 amino acids
Sequence
(BLAST)
001: MAENESSGVR VCVTGGAGFI GSWLVKKLLE KGYTVHATLR NTGDEEKAGL LRRLVPGAAE RLRLFDADLF DAATFAPAIA GCQFVFLVAT PFGLQDAGSK
101: YKSTAEAVVD AVRAILRQCE ESRTVKRVIH TASVSAASPL KEEEVSGVIG YREFISESCW TSPDVDYPLR SAHFDKYILS KVQSEQELLS YNGGESPAFE
201: VVTLALGLVA GDTVLGRVPE TVESAVSPVS RNEAYFGLPR ILQQLLGSLP LVHVDDVCDA LIFCMERRHS IAGRFLCAAA YPTIHDVVGH YARKFPHLDI
301: LKETEAVARV QPDGDRLGEL GFVYKYGIEE ILDSSVACAA RLGCLDATKL SMQKG
Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)
001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.