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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 3
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90629
EES00073
EES07584
EES08604
EES09858
EES09859
EES09860
EES09862
EES09863
EES09864
EES09865
EES14634
KXG29016

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42800.1 EER90629 AT3G55120.1 10536025
AT5G42800.1 EES00073 AT5G08640.1 18467451
AT5G42800.1 EES07584 AT5G08640.1 18467451
AT5G42800.1 EES08604 AT5G13930.1 10536025
AT5G42800.1 EES09858 AT5G13930.1 10536025
AT5G42800.1 EES09859 AT5G13930.1 10536025
AT5G42800.1 EES09860 AT5G13930.1 10536025
AT5G42800.1 EES09862 AT5G13930.1 10536025
AT5G42800.1 EES09863 AT5G13930.1 10536025
AT5G42800.1 EES09864 AT5G13930.1 10536025
AT5G42800.1 EES09865 AT5G13930.1 10536025
AT5G42800.1 EES14634 AT5G13930.1 10536025
AT5G42800.1 KXG29016 AT5G13930.1 10536025
AT5G42800.1 EES08604 AT5G13930.1 21669202
AT5G42800.1 EES09858 AT5G13930.1 21669202
AT5G42800.1 EES09859 AT5G13930.1 21669202
AT5G42800.1 EES09860 AT5G13930.1 21669202
AT5G42800.1 EES09862 AT5G13930.1 21669202
AT5G42800.1 EES09863 AT5G13930.1 21669202
AT5G42800.1 EES09864 AT5G13930.1 21669202
AT5G42800.1 EES09865 AT5G13930.1 21669202
AT5G42800.1 EES14634 AT5G13930.1 21669202
AT5G42800.1 KXG29016 AT5G13930.1 21669202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01135 Sorghum cytosol 83.98 86.86
Zm00001d044122_P001 Maize plastid 82.32 83.47
EES04562 Sorghum plastid 83.15 83.15
EES01136 Sorghum plastid 86.46 80.46
TraesCS3D01G224600.1 Wheat cytosol, extracellular, plastid 75.14 76.84
TraesCS3A01G226600.1 Wheat nucleus 74.59 76.27
HORVU3Hr1G056560.2 Barley cytosol 73.48 75.14
TraesCS3B01G257900.2 Wheat plastid 75.69 70.98
Os01t0633500-00 Rice cytosol, mitochondrion, plasma membrane, plastid 59.94 68.45
GSMUA_Achr3P31110_001 Banana cytosol, endoplasmic reticulum, plastid 65.75 66.85
GSMUA_Achr4P10640_001 Banana cytosol 63.81 65.62
KRH15169 Soybean plastid 62.15 64.66
KRH05848 Soybean plastid 59.67 61.02
VIT_04s0023g02090.t01 Wine grape cytosol 26.8 60.25
KRH71611 Soybean nucleus 56.08 59.88
VIT_18s0001g12800.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane, plastid 61.33 59.2
AT5G42800.1 Thale cress cytosol 58.29 55.24
Bra027457.1-P Field mustard cytosol 58.56 55.06
CDY52372 Canola cytosol 58.56 55.06
CDX95155 Canola cytosol 58.29 54.81
PGSC0003DMT400009287 Potato cytosol 56.91 53.93
Solyc02g085020.2.1 Tomato cytosol 56.35 53.83
KRH05851 Soybean extracellular 17.96 52.42
CDY21246 Canola cytosol 33.15 49.18
EES11487 Sorghum mitochondrion 36.46 38.71
OQU82391 Sorghum cytosol, mitochondrion 33.98 38.56
EES11482 Sorghum cytosol, mitochondrion, plastid 36.46 38.37
KXG27183 Sorghum cytosol 35.91 38.12
EES11485 Sorghum mitochondrion 35.36 37.65
KXG27176 Sorghum cytosol, mitochondrion, plastid 35.36 37.1
KXG27184 Sorghum cytosol 34.81 36.73
KXG27175 Sorghum cytosol 33.7 35.57
KXG27182 Sorghum cytosol 33.7 35.26
EES11483 Sorghum cytosol 33.15 34.68
OQU76902 Sorghum cytosol 35.91 33.42
OQU82393 Sorghum plastid 34.53 32.22
OQU90211 Sorghum cytosol 29.01 30.79
EER88741 Sorghum peroxisome 28.45 29.01
EES14013 Sorghum cytosol 28.18 28.73
OQU76794 Sorghum cytosol, peroxisome, plastid 23.48 27.07
KXG36638 Sorghum mitochondrion 28.45 26.01
Protein Annotations
EnsemblPlants:EES19023EnsemblPlantsGene:SORBI_3009G043800EntrezGene:8075972Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF276
PFAM:PF01370ProteinID:EES19023ProteinID:EES19023.1RefSeq:XP_002440593.1SEG:segSUPFAM:SSF51735
UniParc:UPI0001A88C0FUniProt:C5Z028MapMan:9.2.2.9.1:::
Description
hypothetical protein
Coordinates
chr9:-:4148531..4151725
Molecular Weight (calculated)
38943.7 Da
IEP (calculated)
5.622
GRAVY (calculated)
0.020
Length
362 amino acids
Sequence
(BLAST)
001: MAEAIEGGAS ATKGPVVVTG ASGFVGSWLV MKLLHAGYTV RATVRDPANV EKTKPLLDLP GATERLSLWK ADLAVEGSFD DAIRGCTGVF HVATPMDFES
101: KDPENEVIKP TVEGMISIMQ ACKEAGTVRR IVFTSSAGTV NVEERRKPVY DEDSWTDVDF CRRVKMTGWM YFVSKTLAEK AAMAYAAEHG VDLITVIPTL
201: VVGPFLSAGM PPSLVTAMAL VTGNEAHYSI LKQVQFIHLD DLCDAHLFLF EHPAAAGRYV CSAADATIHG LAAMLRERYP EYNIPRRFPG IDDDLQLVRF
301: SSKKLLDHGF TFRYTTMENM YDAAIRTCRE KGLIPLATAG GEGGSASAGA PGPGGTDAAI SA
Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.