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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES11485 Sorghum mitochondrion 80.35 81.76
KXG27183 Sorghum cytosol 72.25 73.31
EES11487 Sorghum mitochondrion 70.81 71.85
KXG27184 Sorghum cytosol 69.94 70.55
TraesCS2D01G481500.1 Wheat mitochondrion 67.05 67.84
KXG27176 Sorghum cytosol, mitochondrion, plastid 67.05 67.25
OQU82391 Sorghum cytosol, mitochondrion 61.85 67.08
TraesCS2A01G481200.1 Wheat cytosol, mitochondrion, plastid 64.74 65.5
KXG27175 Sorghum cytosol 64.74 65.31
EES11483 Sorghum cytosol 65.03 65.03
TraesCS2B01G612700.1 Wheat cytosol 63.58 64.33
TraesCS2B01G612800.1 Wheat cytosol 63.58 64.33
TraesCS2B01G507600.1 Wheat cytosol 63.01 63.56
TraesCS2D01G483100.1 Wheat cytosol 60.69 63.06
TraesCS2A01G481300.1 Wheat mitochondrion 62.43 62.97
TraesCS2A01G483100.1 Wheat cytosol 56.65 62.82
TraesCS2B01G507500.1 Wheat mitochondrion 61.56 62.28
TraesCS2D01G481700.1 Wheat cytosol 61.27 62.17
TraesCS2D01G481600.1 Wheat cytosol, mitochondrion, plastid 61.56 62.1
TraesCS2A01G579400.1 Wheat cytosol 61.56 62.1
TraesCS2A01G579300.1 Wheat cytosol 61.56 62.1
TraesCS2A01G579500.1 Wheat cytosol 61.27 61.81
TraesCS2B01G507700.1 Wheat cytosol 61.27 61.63
TraesCS2A01G579600.1 Wheat cytosol 60.98 61.52
TraesCS2A01G579200.1 Wheat cytosol 60.98 61.52
EES11482 Sorghum cytosol, mitochondrion, plastid 60.98 61.34
TraesCS2B01G507300.1 Wheat mitochondrion 40.17 61.23
TraesCS2B01G606800.1 Wheat cytosol 60.69 60.87
HORVU2Hr1G108180.1 Barley cytosol 59.83 60.53
Os04t0630400-01 Rice cytosol 60.12 60.12
TraesCS2D01G598900.1 Wheat cytosol 48.27 59.86
HORVU2Hr1G123890.5 Barley cytosol 61.27 59.55
Os04t0630300-01 Rice plastid 58.96 58.96
TraesCS2B01G055100.1 Wheat cytosol 59.54 58.69
TraesCS2A01G481400.1 Wheat mitochondrion 37.28 56.33
OQU82393 Sorghum plastid 62.43 55.67
Os04t0630100-01 Rice cytosol 47.4 51.09
GSMUA_Achr8P01490_001 Banana cytosol 50.87 49.86
VIT_00s0361g00040.t01 Wine grape endoplasmic reticulum, extracellular, golgi 46.24 47.34
KRH41990 Soybean cytosol, extracellular 45.09 46.29
Solyc03g031470.2.1 Tomato golgi 43.93 45.51
PGSC0003DMT400013000 Potato extracellular 43.93 44.97
AT1G61720.1 Thale cress cytosol 43.35 44.12
KRH41993 Soybean golgi 42.49 43.49
CDY07276 Canola cytosol 42.2 42.69
Bra021318.1-P Field mustard cytosol 42.2 42.32
CDY32381 Canola cytosol 42.2 42.32
Bra031403.1-P Field mustard cytosol 40.75 41.72
CDY52321 Canola cytosol 40.75 41.72
CDY25313 Canola cytosol 40.75 41.72
EES01135 Sorghum cytosol 36.71 36.29
EES04562 Sorghum plastid 36.71 35.08
EES19023 Sorghum cytosol, peroxisome, plastid 35.26 33.7
EES01136 Sorghum plastid 36.13 32.13
OQU76902 Sorghum cytosol 34.97 31.11
OQU90211 Sorghum cytosol 29.19 29.62
EER88741 Sorghum peroxisome 30.35 29.58
EES14013 Sorghum cytosol 30.35 29.58
KXG36638 Sorghum mitochondrion 28.03 24.49
OQU76794 Sorghum cytosol, peroxisome, plastid 21.97 24.2
Protein Annotations
EnsemblPlants:KXG27182EnsemblPlantsGene:SORBI_3006G227000Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF288PFAM:PF01370
ProteinID:KXG27182ProteinID:KXG27182.1SUPFAM:SSF51735UniParc:UPI00081ABCF7UniProt:A0A1B6PND9MapMan:35.1
Description
hypothetical protein
Coordinates
chr6:+:57185003..57186639
Molecular Weight (calculated)
37135.8 Da
IEP (calculated)
6.964
GRAVY (calculated)
0.032
Length
346 amino acids
Sequence
(BLAST)
001: MSEGGRKQKT ACVTGGNGYI ASVLIKMLLE NGYAVKTTVR NPDDMAKNSH LKDMQAVGPL TVLRADLLEE GSFDEAVAGC DYAFLIAAPV NLHSKNPEKE
101: LIEPAVRGIL NVMRSCAKAG TVKRVILTSS AAAVAGRPLQ GGGHVLDEES WTDVEYLTAK KSSHWGYGVS KVLAEKEACR FAKEHGINFV SVCPVLTVGA
201: APATKMDTSL HASLSCYPVA SKFPCDEAAF RVLRGIEMAT GCMPLVHAAD LCRAQMFVAE EDAAAGRYIC CSVNTTIVEL AHFLADKYPQ YTVKTHLLSS
301: GVLEKPRVSL SSARLLGEGF KFKYETLDEI YDDVVAQGKA LGVLPN
Best Arabidopsis Sequence Match ( AT1G09510.1 )
(BLAST)
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.