Factsheet for TraesCS2A01G481200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G481500.1	Wheat	mitochondrion	90.06	90.06
TraesCS2B01G507300.1	Wheat	mitochondrion	57.02	85.9
TraesCS2A01G481300.1	Wheat	mitochondrion	84.21	83.97
TraesCS2A01G481700.1	Wheat	cytosol	35.67	74.85
KXG27183	Sorghum	cytosol	73.39	73.61
KXG27176	Sorghum	cytosol, mitochondrion, plastid	73.1	72.46
TraesCS2A01G483100.1	Wheat	cytosol	66.08	72.44
TraesCS2A01G579400.1	Wheat	cytosol	72.51	72.3
TraesCS2A01G579300.1	Wheat	cytosol	72.51	72.3
EES11485	Sorghum	mitochondrion	71.64	72.06
TraesCS2A01G579500.1	Wheat	cytosol	72.22	72.01
TraesCS2A01G579600.1	Wheat	cytosol	71.93	71.72
TraesCS2A01G579200.1	Wheat	cytosol	71.64	71.43
Zm00001d026370_P001	Maize	mitochondrion	71.05	70.85
EES11487	Sorghum	mitochondrion	70.18	70.38
KXG27184	Sorghum	cytosol	70.47	70.26
OQU82391	Sorghum	cytosol, mitochondrion	65.2	69.91
KXG27175	Sorghum	cytosol	69.01	68.8
TraesCS2A01G481400.1	Wheat	mitochondrion	45.91	68.56
TraesCS2A01G481900.1	Wheat	cytosol	66.37	67.16
TraesCS2A01G482100.1	Wheat	cytosol	66.08	66.86
EES11483	Sorghum	cytosol	67.54	66.76
EES11482	Sorghum	cytosol, mitochondrion, plastid	66.67	66.28
TraesCS2A01G482200.1	Wheat	peroxisome	65.5	66.27
Zm00001d026369_P003	Maize	cytosol	70.76	65.94
TraesCS2A01G481500.1	Wheat	cytosol	64.04	64.79
KXG27182	Sorghum	cytosol	65.5	64.74
Zm00001d042594_P001	Maize	cytosol	33.33	64.41
Zm00001d026371_P001	Maize	cytosol	64.62	64.06
Os04t0630300-01	Rice	plastid	63.45	62.72
TraesCS2A01G482300.1	Wheat	plastid	49.12	61.76
Os04t0630400-01	Rice	cytosol	62.28	61.56
TraesCS2A01G481800.1	Wheat	cytosol	49.42	59.72
OQU82393	Sorghum	plastid	65.2	57.47
Os04t0630100-01	Rice	cytosol	50.88	54.21
GSMUA_Achr8P01490_001	Banana	cytosol	54.39	52.69
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	48.54	49.11
KRH41990	Soybean	cytosol, extracellular	47.37	48.07
Solyc03g031470.2.1	Tomato	golgi	46.49	47.6
PGSC0003DMT400013000	Potato	extracellular	46.78	47.34
KRH41993	Soybean	golgi	45.03	45.56
AT1G61720.1	Thale cress	cytosol	43.86	44.12
CDY07276	Canola	cytosol	43.27	43.27
CDY25313	Canola	cytosol	42.69	43.2
CDY32381	Canola	cytosol	43.57	43.19
Bra021318.1-P	Field mustard	cytosol	43.27	42.9
CDY52321	Canola	cytosol	42.11	42.6
Bra031403.1-P	Field mustard	cytosol	42.11	42.6
TraesCS7A01G450700.1	Wheat	cytosol, plastid	37.43	36.06
TraesCS3A01G226600.1	Wheat	nucleus	36.84	35.59
TraesCS5A01G554500.1	Wheat	endoplasmic reticulum	24.85	31.84
TraesCS2A01G177200.1	Wheat	mitochondrion	30.41	30.68
TraesCS2A01G177500.1	Wheat	mitochondrion	29.53	30.15
TraesCS2A01G177400.1	Wheat	mitochondrion	29.53	29.97
TraesCS2A01G174100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.82	29.31
TraesCS7A01G505200.1	Wheat	peroxisome	28.66	27.22
TraesCS7A01G505300.1	Wheat	cytosol	18.71	24.06

Protein Annotations

EnsemblPlants:TraesCS2A01G481200.1	EnsemblPlantsGene:TraesCS2A01G481200	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF288	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2A:+:718574651..718576202

Molecular Weight (calculated)

36538.8 Da

IEP (calculated)

6.662

GRAVY (calculated)

0.045

Length

342 amino acids

Sequence
(BLAST)

001: MASAAGDGTR RKTACVTGGN GYIASALVKT LLEKGYAVKT TVRNPDDMEK NSHLKDLQAL GPLEVLRADL VEEGSFDGAV AGCDYAFLVA APVNLYAEDP
101: ERDVIEPAVH GTLNVLRSCV RAGTVRRVVL TSSAAAVSSR PLEGDGHVLD EDSWSDVEFL RSTKTGAWAY PVSKVLLEKA ACAFALEHGI SLVTVCPVVT
201: VGAAPAAKVN TSVPDILSLL SGDDARISKL EFIERVTGAI PMVHIDDLCR AELFLAEEKA ASGRYNCGSV NTTVVGLARF LAAKYPQYNV KTDRYAGLTE
301: KPRVCISSAK LVKEGFKYKY KNLDGIYGSV VEYGRALGIL PY

Best Arabidopsis Sequence Match ( AT1G09510.1 )
(BLAST)

001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV

Arabidopsis Description

At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.