Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G482100.1 | Wheat | cytosol | 91.42 | 91.42 |
| TraesCS2B01G508400.1 | Wheat | cytosol, peroxisome, plastid | 89.94 | 89.94 |
| HORVU2Hr1G108250.2 | Barley | cytosol | 89.05 | 88.53 |
| TraesCS2A01G481900.1 | Wheat | cytosol | 83.43 | 83.43 |
| TraesCS2A01G482200.1 | Wheat | peroxisome | 82.84 | 82.84 |
| TraesCS2A01G481700.1 | Wheat | cytosol | 39.65 | 82.21 |
| TraesCS2A01G482300.1 | Wheat | plastid | 63.61 | 79.04 |
| TraesCS2A01G481500.1 | Wheat | cytosol | 78.11 | 78.11 |
| TraesCS2A01G481800.1 | Wheat | cytosol | 60.06 | 71.73 |
| Os04t0630800-01 | Rice | cytosol | 71.3 | 70.06 |
| Os04t0631000-00 | Rice | cytosol | 69.53 | 69.94 |
| TraesCS2A01G481200.1 | Wheat | cytosol, mitochondrion, plastid | 66.86 | 66.08 |
| TraesCS2A01G481300.1 | Wheat | mitochondrion | 64.5 | 63.56 |
| TraesCS2A01G579400.1 | Wheat | cytosol | 62.13 | 61.22 |
| TraesCS2A01G579300.1 | Wheat | cytosol | 61.83 | 60.93 |
| TraesCS2A01G579500.1 | Wheat | cytosol | 61.83 | 60.93 |
| TraesCS2A01G579600.1 | Wheat | cytosol | 61.54 | 60.64 |
| TraesCS2A01G579200.1 | Wheat | cytosol | 61.24 | 60.35 |
| TraesCS2A01G483100.1 | Wheat | cytosol | 55.03 | 59.62 |
| Os04t0630600-00 | Rice | plasma membrane | 62.72 | 59.38 |
| TraesCS2A01G481400.1 | Wheat | mitochondrion | 37.28 | 55.02 |
| Os04t0630900-01 | Rice | cytosol | 39.35 | 52.16 |
| GSMUA_Achr8P01490_001 | Banana | cytosol | 54.14 | 51.84 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 50.89 | 50.89 |
| KRH41990 | Soybean | cytosol, extracellular | 50.3 | 50.45 |
| KRH41993 | Soybean | golgi | 49.11 | 49.11 |
| Solyc03g031470.2.1 | Tomato | golgi | 47.34 | 47.9 |
| PGSC0003DMT400013000 | Potato | extracellular | 47.63 | 47.63 |
| CDY25313 | Canola | cytosol | 44.97 | 44.97 |
| CDY07276 | Canola | cytosol | 45.27 | 44.74 |
| AT1G61720.1 | Thale cress | cytosol | 44.97 | 44.71 |
| CDY52321 | Canola | cytosol | 44.67 | 44.67 |
| Bra031403.1-P | Field mustard | cytosol | 44.67 | 44.67 |
| CDY32381 | Canola | cytosol | 45.56 | 44.64 |
| Bra021318.1-P | Field mustard | cytosol | 44.97 | 44.06 |
| TraesCS3A01G226600.1 | Wheat | nucleus | 36.69 | 35.03 |
| TraesCS7A01G450700.1 | Wheat | cytosol, plastid | 35.21 | 33.52 |
| TraesCS5A01G554500.1 | Wheat | endoplasmic reticulum | 24.26 | 30.71 |
| TraesCS2A01G177200.1 | Wheat | mitochondrion | 29.88 | 29.79 |
| TraesCS2A01G177500.1 | Wheat | mitochondrion | 29.29 | 29.55 |
| TraesCS2A01G177400.1 | Wheat | mitochondrion | 29.29 | 29.38 |
| TraesCS2A01G174100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 30.18 | 29.31 |
| TraesCS7A01G505200.1 | Wheat | peroxisome | 28.7 | 26.94 |
| TraesCS7A01G505300.1 | Wheat | cytosol | 18.34 | 23.31 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G482100.1 | EnsemblPlantsGene:TraesCS2A01G482100 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF557 | PFAM:PF01370 |
| SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:718883587..718885416
Molecular Weight (calculated)
36554.6 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.135
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGEGKRTA CVTGGSGYIA SALIKLLLQK GYAVKTTVRD PDDMEKNSHL KDLQALGPLE IIGARLDEEG SFDDAVSGCD YAFLVAAPMN IGSADPERDL
101: IEPAVQGTLN VMRSCVRAGT VKRVILTSSD AGVSRRPLHG GGHMLDEGSW SDVEYLRTNR PPTWEYAVSK VLLEKAASKF AEENGISLAT VLPVFTLGAA
201: PVSKARTSVP VTLSLLSGDE TRRDILMGLQ SVTDSVSICH VEDLCRAEVF VAENKSSAGR YICCSHNTTV VQLARLVAEK YPQYNVKLER FAGSQEKPRA
301: CLSSQKLIGE GFEFKHDDLS EIFDDLVEYG KTTGILPY
101: IEPAVQGTLN VMRSCVRAGT VKRVILTSSD AGVSRRPLHG GGHMLDEGSW SDVEYLRTNR PPTWEYAVSK VLLEKAASKF AEENGISLAT VLPVFTLGAA
201: PVSKARTSVP VTLSLLSGDE TRRDILMGLQ SVTDSVSICH VEDLCRAEVF VAENKSSAGR YICCSHNTTV VQLARLVAEK YPQYNVKLER FAGSQEKPRA
301: CLSSQKLIGE GFEFKHDDLS EIFDDLVEYG KTTGILPY
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.