Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G482100.1 | Wheat | cytosol | 91.42 | 91.42 |
| TraesCS2B01G508400.1 | Wheat | cytosol, peroxisome, plastid | 90.83 | 90.83 |
| HORVU2Hr1G108250.2 | Barley | cytosol | 91.12 | 90.59 |
| TraesCS2D01G482000.2 | Wheat | cytosol | 57.99 | 84.85 |
| TraesCS2D01G482200.1 | Wheat | peroxisome | 84.02 | 84.02 |
| TraesCS2D01G481900.2 | Wheat | cytosol | 81.95 | 81.95 |
| TraesCS2D01G482400.1 | Wheat | cytosol | 55.03 | 80.52 |
| TraesCS2D01G481800.1 | Wheat | mitochondrion | 76.63 | 77.78 |
| TraesCS2D01G500300.2 | Wheat | peroxisome | 84.02 | 76.55 |
| Os04t0630800-01 | Rice | cytosol | 72.49 | 71.22 |
| Os04t0631000-00 | Rice | cytosol | 69.53 | 69.94 |
| TraesCS2D01G481500.1 | Wheat | mitochondrion | 68.93 | 68.13 |
| TraesCS2D01G481600.1 | Wheat | cytosol, mitochondrion, plastid | 64.79 | 63.85 |
| TraesCS2D01G483100.1 | Wheat | cytosol | 62.13 | 63.06 |
| TraesCS2D01G481700.1 | Wheat | cytosol | 63.61 | 63.05 |
| Os04t0630600-00 | Rice | plasma membrane | 63.31 | 59.94 |
| TraesCS2D01G598900.1 | Wheat | cytosol | 49.11 | 59.5 |
| Os04t0630900-01 | Rice | cytosol | 40.53 | 53.73 |
| GSMUA_Achr8P01490_001 | Banana | cytosol | 54.44 | 52.12 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 50.59 | 50.59 |
| KRH41990 | Soybean | cytosol, extracellular | 50.3 | 50.45 |
| KRH41993 | Soybean | golgi | 49.41 | 49.41 |
| Solyc03g031470.2.1 | Tomato | golgi | 47.63 | 48.2 |
| PGSC0003DMT400013000 | Potato | extracellular | 47.93 | 47.93 |
| CDY07276 | Canola | cytosol | 46.75 | 46.2 |
| AT1G61720.1 | Thale cress | cytosol | 46.15 | 45.88 |
| CDY25313 | Canola | cytosol | 45.56 | 45.56 |
| CDY32381 | Canola | cytosol | 46.45 | 45.51 |
| CDY52321 | Canola | cytosol | 45.27 | 45.27 |
| Bra031403.1-P | Field mustard | cytosol | 45.27 | 45.27 |
| Bra021318.1-P | Field mustard | cytosol | 45.86 | 44.93 |
| TraesCS3D01G224600.1 | Wheat | cytosol, extracellular, plastid | 38.17 | 36.44 |
| TraesCS7D01G440000.1 | Wheat | cytosol | 36.69 | 35.03 |
| TraesCS2D01G185400.2 | Wheat | mitochondrion | 29.59 | 29.5 |
| TraesCS2D01G185600.1 | Wheat | mitochondrion | 28.4 | 28.66 |
| TraesCS2D01G181300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 28.7 | 28.12 |
| TraesCS7D01G152300.1 | Wheat | cytosol, peroxisome, plastid | 29.29 | 27.97 |
| TraesCS7D01G492800.1 | Wheat | mitochondrion, plastid | 28.11 | 24.23 |
| TraesCS7D01G493000.1 | Wheat | mitochondrion, plastid | 28.11 | 24.23 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G482100.1 | EnsemblPlantsGene:TraesCS2D01G482100 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF557 | PFAM:PF01370 |
| SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:584661350..584663167
Molecular Weight (calculated)
36553.6 Da
IEP (calculated)
5.678
GRAVY (calculated)
-0.127
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGEGKKTA CVTGGSGYIA SALIKLLLEK GYAVKTTVRD PDDTEKNSHL KDLQALGPLE IIRARLDEEG SFDDAVSGSD YAFLVAAPMN IGSADPERDM
101: IEPAVQGTLN VMRSCVRAGT VKRVILTSSD AGVSRRPLHG GGHVLDEGSW SDVEYLKANK PPTWEYAVSK VLLEKAASKF AVENGISLAT VLPVFTLGAA
201: PVSKARTSVP VTLSLLSGDE TQLHILIGLQ SVTDSVSICH VDDLCRAEVF IAENESSSGR YICCSHNTTV VQLARLLAEK YPQYNMKPER FAGSQEQPRV
301: CLSSQKLIRE GFEFKHNDLG EIFDDLVKYG RTTGILPY
101: IEPAVQGTLN VMRSCVRAGT VKRVILTSSD AGVSRRPLHG GGHVLDEGSW SDVEYLKANK PPTWEYAVSK VLLEKAASKF AVENGISLAT VLPVFTLGAA
201: PVSKARTSVP VTLSLLSGDE TQLHILIGLQ SVTDSVSICH VDDLCRAEVF IAENESSSGR YICCSHNTTV VQLARLLAEK YPQYNMKPER FAGSQEQPRV
301: CLSSQKLIRE GFEFKHNDLG EIFDDLVKYG RTTGILPY
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.