Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G482400.1 | Wheat | cytosol | 76.19 | 76.19 |
| TraesCS2B01G508300.1 | Wheat | cytosol | 83.12 | 67.37 |
| TraesCS2D01G482100.1 | Wheat | cytosol | 84.85 | 57.99 |
| HORVU2Hr1G108250.2 | Barley | cytosol | 83.55 | 56.76 |
| TraesCS2D01G481900.2 | Wheat | cytosol | 78.36 | 53.55 |
| TraesCS2D01G482200.1 | Wheat | peroxisome | 77.92 | 53.25 |
| TraesCS2D01G598900.1 | Wheat | cytosol | 61.04 | 50.54 |
| TraesCS2D01G481800.1 | Wheat | mitochondrion | 72.73 | 50.45 |
| Os04t0630900-01 | Rice | cytosol | 54.55 | 49.41 |
| TraesCS2D01G500300.2 | Wheat | peroxisome | 79.22 | 49.33 |
| Os04t0630800-01 | Rice | cytosol | 71.43 | 47.97 |
| Os04t0631000-00 | Rice | cytosol | 69.7 | 47.92 |
| TraesCS2D01G483100.1 | Wheat | cytosol | 67.53 | 46.85 |
| TraesCS2D01G481500.1 | Wheat | mitochondrion | 68.83 | 46.49 |
| TraesCS2D01G481700.1 | Wheat | cytosol | 66.67 | 45.16 |
| TraesCS2D01G481600.1 | Wheat | cytosol, mitochondrion, plastid | 66.67 | 44.9 |
| Os04t0630600-00 | Rice | plasma membrane | 62.34 | 40.34 |
| GSMUA_Achr8P01490_001 | Banana | cytosol | 54.98 | 35.98 |
| KRH41990 | Soybean | cytosol, extracellular | 51.52 | 35.31 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 51.52 | 35.21 |
| KRH41993 | Soybean | golgi | 50.65 | 34.62 |
| PGSC0003DMT400013000 | Potato | extracellular | 50.22 | 34.32 |
| Solyc03g031470.2.1 | Tomato | golgi | 49.35 | 34.13 |
| CDY07276 | Canola | cytosol | 47.19 | 31.87 |
| CDY32381 | Canola | cytosol | 47.19 | 31.59 |
| AT1G61720.1 | Thale cress | cytosol | 46.32 | 31.47 |
| CDY52321 | Canola | cytosol | 45.45 | 31.07 |
| Bra031403.1-P | Field mustard | cytosol | 45.45 | 31.07 |
| Bra021318.1-P | Field mustard | cytosol | 46.32 | 31.01 |
| CDY25313 | Canola | cytosol | 45.02 | 30.77 |
| TraesCS7D01G440000.1 | Wheat | cytosol | 39.83 | 25.99 |
| TraesCS3D01G224600.1 | Wheat | cytosol, extracellular, plastid | 39.39 | 25.71 |
| TraesCS2D01G185400.2 | Wheat | mitochondrion | 31.17 | 21.24 |
| TraesCS2D01G185600.1 | Wheat | mitochondrion | 29.87 | 20.6 |
| TraesCS2D01G181300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 29.0 | 19.42 |
| TraesCS7D01G152300.1 | Wheat | cytosol, peroxisome, plastid | 28.14 | 18.36 |
| TraesCS7D01G492800.1 | Wheat | mitochondrion, plastid | 29.87 | 17.6 |
| TraesCS7D01G493000.1 | Wheat | mitochondrion, plastid | 29.87 | 17.6 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G482000.2 | EnsemblPlantsGene:TraesCS2D01G482000 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF557 | PFAM:PF01370 |
| SUPFAM:SSF51735 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:584657188..584658533
Molecular Weight (calculated)
25068.0 Da
IEP (calculated)
5.862
GRAVY (calculated)
-0.065
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASEGKKTA CVTGGSGYIA SALIKLLLEK GYAVKTTVRD PGSFLASWLL VLSYDTEKNS HLKDLQALGP LEVIRAWLDE EGSFDDAVSG CDYAFLVAAP
101: MNFGSADPER DMIEPAVQGT LNVMRSCVRA GTVKRVILTS SDASVSRRPL QGDRHVLDES SWSDVEYLRA NKPPTWEYVV SKVLLEKAAT KFAEENGISL
201: VTVLPVFTLG TAPVSKARTS APPYPLPINW R
101: MNFGSADPER DMIEPAVQGT LNVMRSCVRA GTVKRVILTS SDASVSRRPL QGDRHVLDES SWSDVEYLRA NKPPTWEYVV SKVLLEKAAT KFAEENGISL
201: VTVLPVFTLG TAPVSKARTS APPYPLPINW R
001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
Arabidopsis Description
At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.