Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G226600.1 | Wheat | nucleus | 96.61 | 96.61 |
| HORVU3Hr1G056560.2 | Barley | cytosol | 95.48 | 95.48 |
| TraesCS3B01G257900.2 | Wheat | plastid | 97.74 | 89.64 |
| EES01135 | Sorghum | cytosol | 80.23 | 81.14 |
| Zm00001d011438_P001 | Maize | extracellular | 77.4 | 75.9 |
| EES04562 | Sorghum | plastid | 76.84 | 75.14 |
| EES19023 | Sorghum | cytosol, peroxisome, plastid | 76.84 | 75.14 |
| Zm00001d044122_P001 | Maize | plastid | 75.71 | 75.07 |
| Os01t0633500-00 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 66.38 | 74.13 |
| EES01136 | Sorghum | plastid | 75.42 | 68.64 |
| GSMUA_Achr3P31110_001 | Banana | cytosol, endoplasmic reticulum, plastid | 68.93 | 68.54 |
| GSMUA_Achr4P10640_001 | Banana | cytosol | 66.1 | 66.48 |
| KRH15169 | Soybean | plastid | 61.86 | 62.93 |
| KRH05848 | Soybean | plastid | 60.45 | 60.45 |
| VIT_04s0023g02090.t01 | Wine grape | cytosol | 26.84 | 59.01 |
| VIT_18s0001g12800.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane, plastid | 62.43 | 58.93 |
| KRH71611 | Soybean | nucleus | 54.8 | 57.23 |
| AT5G42800.1 | Thale cress | cytosol | 60.73 | 56.28 |
| Bra027457.1-P | Field mustard | cytosol | 59.89 | 55.06 |
| CDY52372 | Canola | cytosol | 59.89 | 55.06 |
| CDX95155 | Canola | cytosol | 59.6 | 54.81 |
| Solyc02g085020.2.1 | Tomato | cytosol | 58.47 | 54.62 |
| PGSC0003DMT400009287 | Potato | cytosol | 58.76 | 54.45 |
| KRH05851 | Soybean | extracellular | 16.95 | 48.39 |
| CDY21246 | Canola | cytosol | 33.33 | 48.36 |
| TraesCS2D01G482400.1 | Wheat | cytosol | 25.99 | 39.83 |
| TraesCS2D01G481900.2 | Wheat | cytosol | 37.85 | 39.65 |
| TraesCS2D01G482000.2 | Wheat | cytosol | 25.71 | 39.39 |
| TraesCS2D01G481800.1 | Wheat | mitochondrion | 37.01 | 39.34 |
| TraesCS2D01G481500.1 | Wheat | mitochondrion | 37.29 | 38.6 |
| TraesCS2D01G482100.1 | Wheat | cytosol | 36.44 | 38.17 |
| TraesCS7D01G440000.1 | Wheat | cytosol | 37.85 | 37.85 |
| TraesCS2D01G482200.1 | Wheat | peroxisome | 35.31 | 36.98 |
| TraesCS2D01G481600.1 | Wheat | cytosol, mitochondrion, plastid | 35.59 | 36.73 |
| TraesCS2D01G481700.1 | Wheat | cytosol | 35.31 | 36.66 |
| TraesCS2D01G483100.1 | Wheat | cytosol | 34.46 | 36.64 |
| TraesCS2D01G598900.1 | Wheat | cytosol | 28.53 | 36.2 |
| TraesCS2D01G500300.2 | Wheat | peroxisome | 35.03 | 33.42 |
| TraesCS2D01G185600.1 | Wheat | mitochondrion | 28.25 | 29.85 |
| TraesCS7D01G152300.1 | Wheat | cytosol, peroxisome, plastid | 29.1 | 29.1 |
| TraesCS2D01G185400.2 | Wheat | mitochondrion | 27.68 | 28.91 |
| TraesCS2D01G181300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 26.55 | 27.25 |
| TraesCS7D01G492800.1 | Wheat | mitochondrion, plastid | 28.53 | 25.77 |
| TraesCS7D01G493000.1 | Wheat | mitochondrion, plastid | 28.53 | 25.77 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G224600.1 | EnsemblPlantsGene:TraesCS3D01G224600 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF276 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:9.2.2.9.1 | : | : |
Description
No Description!
Coordinates
chr3D:-:305876413..305877772
Molecular Weight (calculated)
38512.1 Da
IEP (calculated)
4.912
GRAVY (calculated)
-0.096
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGNKGPVVV TGASGFVGSW LVMKLLQVGY TVRATVRDPA NVEKNKPLLE LPGAKERLSI WKADLSEEGS FDDAIAGCTG VFHVATPMDF DSQDPENEVI
101: KPTVEGMLSI MRACKEAGTV KRIVFTSSAG SVNIEERQRP AYDQDNWSDI DFCRRVKMTG WMYFVSKSLA EKAAMEYASE NGLDFISIIP TLVVGPFLSA
201: GMPPSLVTAL ALITGNEAHY SILKQVQLVH LDDLCDAMTF LFEHPEANGR YICSSHDATI HGLARMLRDR FPEYSIPQKF AGVDDDLQPI HFSSKKLLDH
301: GFSFRYTAED MFDAAIRTCR EKGLIPLGDA PPPAAGGKLG ALAAGEGQAI GAET
101: KPTVEGMLSI MRACKEAGTV KRIVFTSSAG SVNIEERQRP AYDQDNWSDI DFCRRVKMTG WMYFVSKSLA EKAAMEYASE NGLDFISIIP TLVVGPFLSA
201: GMPPSLVTAL ALITGNEAHY SILKQVQLVH LDDLCDAMTF LFEHPEANGR YICSSHDATI HGLARMLRDR FPEYSIPQKF AGVDDDLQPI HFSSKKLLDH
301: GFSFRYTAED MFDAAIRTCR EKGLIPLGDA PPPAAGGKLG ALAAGEGQAI GAET
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.