Factsheet for TraesCS5D01G488600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G493500.1
TraesCS2B01G521500.1
TraesCS2B01G613300.1
TraesCS2D01G493400.1
TraesCS3A01G226600.1
TraesCS3B01G257900.2
TraesCS3D01G224600.1
TraesCS4B01G344800.1
TraesCS4B01G344900.1
TraesCS4D01G339800.1
TraesCS5A01G475600.1
TraesCS5A01G513700.1
TraesCS5B01G488900.1
TraesCS5D01G489000.1
TraesCS6A01G331400.1
TraesCS6B01G362100.1
TraesCS6D01G310700.1
TraesCS7B01G038200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	TraesCS2A01G493500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G521500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G613300.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2D01G493400.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS5A01G475600.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5B01G488900.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5D01G489000.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS7B01G038200.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	10536025
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	21669202
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS4B01G344800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G488700.1	Wheat	cytosol	100.0	100.0
TraesCS2D01G034500.1	Wheat	cytosol	83.8	83.8
TraesCS2D01G027700.1	Wheat	cytosol	82.28	82.49
TraesCS2D01G027900.2	Wheat	cytosol	82.28	82.49
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	64.56	81.47
VIT_05s0136g00260.t01	Wine grape	cytosol	78.99	80.21
VIT_14s0068g00930.t01	Wine grape	cytosol	79.49	79.9
VIT_14s0068g00920.t01	Wine grape	cytosol	79.49	79.9
GSMUA_Achr10P...	Banana	cytosol	65.32	79.63
TraesCS2D01G027800.1	Wheat	cytosol	42.53	79.62
KRH42776	Soybean	cytosol	51.39	79.61
KRH42759	Soybean	cytosol	77.97	79.38
KRH42780	Soybean	cytosol	77.97	79.38
KRH42778	Soybean	cytosol	77.97	79.38
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	65.82	79.27
KRH42758	Soybean	cytosol	77.72	79.12
KRH42757	Soybean	cytosol	77.72	79.12
KRH42775	Soybean	cytosol	77.72	79.12
KRH42783	Soybean	cytosol	77.72	79.12
KRH58872	Soybean	cytosol	77.72	79.12
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	77.47	78.66
KRH42760	Soybean	cytosol	77.22	78.61
KRH75544	Soybean	cytosol	77.22	78.61
KRH37579	Soybean	cytosol	76.96	78.35
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	76.96	78.15
CDX78547	Canola	cytosol	77.72	77.92
KRH71115	Soybean	cytosol	76.2	77.58
CDX70528	Canola	cytosol	77.72	77.53
CDX69618	Canola	cytosol	77.47	77.47
PGSC0003DMT400076178	Potato	cytosol	76.2	77.38
CDX91090	Canola	cytosol	77.47	77.27
KRG94730	Soybean	cytosol	76.46	77.24
Bra008792.1-P	Field mustard	cytosol	77.22	77.22
AT5G13930.1	Thale cress	cytosol	77.22	77.22
Solyc09g091510.2.1	Tomato	cytosol, extracellular	75.95	77.12
CDY09836	Canola	cytosol	76.96	76.96
EES14634	Sorghum	cytosol	77.47	76.88
Bra006224.1-P	Field mustard	cytosol	76.96	76.77
Bra023441.1-P	Field mustard	cytosol	76.2	76.4
KRH27737	Soybean	cytosol	75.19	76.35
KRH77699	Soybean	endoplasmic reticulum	75.19	76.35
Bra020688.1-P	Field mustard	cytosol	74.43	74.62
CDY51056	Canola	cytosol	74.18	74.37
Bra036307.1-P	Field mustard	cytosol	73.92	74.3
CDY05664	Canola	cytosol	73.67	73.86
TraesCS1D01G033800.1	Wheat	cytosol	74.18	73.62
TraesCS1D01G033600.1	Wheat	cytosol	74.18	73.43
PGSC0003DMT400076179	Potato	cytosol	68.86	71.77
GSMUA_Achr10P...	Banana	mitochondrion	61.77	71.14
CDY07114	Canola	cytosol	72.15	69.51
TraesCS2D01G530600.1	Wheat	cytosol, plastid	83.54	69.04
CDY05666	Canola	mitochondrion	65.06	61.48
TraesCS6D01G197900.1	Wheat	cytosol	38.73	52.76
TraesCS1D01G359600.1	Wheat	cytosol	50.38	50.51
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	49.62	49.0
TraesCS6D01G278200.1	Wheat	cytosol	49.37	48.63
TraesCS2D01G051300.1	Wheat	cytosol	47.59	46.88
TraesCS3D01G500500.1	Wheat	cytosol	47.59	46.88
TraesCS7D01G046500.1	Wheat	unclear	46.08	46.08
TraesCS2D01G016200.1	Wheat	cytosol	45.06	44.61
TraesCS7D01G089300.1	Wheat	mitochondrion	44.56	44.33
TraesCS2D01G030600.1	Wheat	mitochondrion	43.29	44.3
TraesCS4D01G351300.1	Wheat	mitochondrion	44.56	44.22
TraesCS7D01G047000.1	Wheat	cytosol, plastid	44.56	44.22
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	43.8	43.8
TraesCS2D01G016100.1	Wheat	cytosol	43.54	43.65
TraesCS6D01G018500.1	Wheat	plastid	44.3	39.95
TraesCS5D01G003600.1	Wheat	cytosol	38.73	36.34
TraesCS1D01G157500.1	Wheat	cytosol	34.94	35.38

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451
ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS5D01G488600	EnsemblPlants:TraesCS5D01G488600.1	TIGR:cd00831	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:523938253..523939965

Molecular Weight (calculated)

43277.3 Da

IEP (calculated)

6.445

GRAVY (calculated)

-0.045

Length

395 amino acids

Sequence
(BLAST)

001: MAAAVTVDEV MKMQRAQGPA TVLAIGTATP HNCVYQADYA DYYFRITNSE HLTDLKDKFQ RMCDRSMIRK RYMHVTEEIL KENPNVCAYM APSLDARQDM
101: VLGEVPKLGK EAAHKAIKEW GQPLSKITHL VFCTTSGVDM PGADYQLTKM LGLHPSVRRV MLYQQGCFAG GTVLRVAKDL AENNRGARVL VVCSEITAVT
201: FRGPCDTQLD SMVGQALFGD GAAAVVVGAD PDVLVERPLF QLVSASQTIL PDTDGFIKGH LREVGLTFHL HKDVPVAISK NIQQALEDAF APLGIDDWNS
301: IFWVAHPGGP AILDMVEAEA KLDKRRMRAT RHILSEYGNM SSACVLFILD EMRKRSAEDG HATTGEGLDW GVLFGFGPGL TVETVVLHSV RTTAA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.