Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G521500.1 | Wheat | golgi | 91.12 | 84.13 |
| Zm00001d001960_P001 | Maize | plastid | 81.09 | 77.32 |
| EES13031 | Sorghum | cytosol | 81.09 | 75.67 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 73.93 | 72.07 |
| AT3G51240.1 | Thale cress | cytosol | 73.64 | 71.79 |
| CDX90656 | Canola | cytosol | 71.06 | 70.86 |
| CDX77983 | Canola | cytosol | 72.21 | 70.39 |
| CDY29008 | Canola | cytosol | 70.49 | 70.29 |
| Bra036828.1-P | Field mustard | cytosol | 71.92 | 70.11 |
| CDX73739 | Canola | cytosol | 71.92 | 70.11 |
| PGSC0003DMT400009175 | Potato | cytosol | 71.92 | 69.72 |
| Solyc02g083860.2.1 | Tomato | cytosol | 72.21 | 69.61 |
| Bra012862.1-P | Field mustard | cytosol | 69.63 | 69.43 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 72.21 | 69.42 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 73.64 | 69.09 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 72.49 | 67.83 |
| KXG27349 | Sorghum | plastid | 81.66 | 66.13 |
| KRH76658 | Soybean | cytosol | 67.91 | 64.93 |
| KRH69784 | Soybean | cytosol | 69.63 | 64.8 |
| KRH08080 | Soybean | cytosol | 68.77 | 64.52 |
| KRH69787 | Soybean | nucleus | 69.34 | 64.36 |
| CDX76765 | Canola | cytosol | 38.4 | 56.3 |
| Bra014831.1-P | Field mustard | cytosol | 49.0 | 53.11 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 44.41 | 52.9 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 57.59 | 49.51 |
| TraesCS7B01G063700.1 | Wheat | plastid | 34.67 | 36.23 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 31.81 | 35.92 |
| TraesCS2B01G412900.1 | Wheat | plastid | 35.24 | 35.24 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 32.09 | 34.57 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 32.95 | 34.43 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 31.81 | 33.04 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 31.81 | 32.65 |
| TraesCS7B01G020000.1 | Wheat | plastid | 31.52 | 31.79 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 33.24 | 31.69 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 33.81 | 31.64 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 24.07 | 31.34 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 31.81 | 31.01 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 32.66 | 30.98 |
| TraesCS6B01G046800.1 | Wheat | plastid | 30.66 | 30.92 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 30.37 | 30.9 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 30.09 | 30.17 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 29.8 | 30.06 |
| TraesCS6B01G318000.1 | Wheat | plastid | 28.08 | 28.82 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 28.65 | 28.74 |
| Os08t0480200-01 | Rice | cytosol | 27.51 | 28.49 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 28.37 | 28.45 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 21.78 | 28.15 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 27.51 | 27.51 |
| TraesCS6B01G048100.1 | Wheat | plastid | 26.07 | 27.33 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.52 | 27.23 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 28.08 | 27.22 |
| TraesCS4B01G003300.1 | Wheat | plastid | 29.51 | 26.61 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 25.5 | 26.49 |
| TraesCS6B01G318100.1 | Wheat | plastid | 25.79 | 26.24 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 24.07 | 25.69 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 22.92 | 24.39 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 24.64 | 23.96 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 25.79 | 22.78 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 28.08 | 22.27 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.57 | 0.32 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G613300.1 | EnsemblPlantsGene:TraesCS2B01G613300 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SUPFAM:SSF51197 | MapMan:9.2.2.4.3 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:792682632..792683887
Molecular Weight (calculated)
38893.2 Da
IEP (calculated)
5.906
GRAVY (calculated)
-0.374
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSNRMFL PTAASWEATV RPSFVRDEDE RPKVAHDHFS DAVPVISLQG IDGVCRAEIR DRVAAACEDW GLFQVVDHGV DADLAADMAR LSREFFALPA
101: EDKVRYDMSG GKKGGFIVSS HLQQGEAVQD WRELVTYFSY PVKARDYGRW PEKPAGWRAV VERYSERLME LSCKLLGVLS EAMGLETESL AKACVDMDQK
201: VVVNFYPRCP QPELTLGVKR HTDPGTITLL LQDLVGGLQA TRDGGKTWIT VQPVSGAFVV NLGDHGHYLS NGRFKNADHR AVVNGESSRL SIATFQNPAP
301: DARVWPLAVK EGEETILEDP ITFAEMYRRK MEGDLDRASR KKQAKDQLN
101: EDKVRYDMSG GKKGGFIVSS HLQQGEAVQD WRELVTYFSY PVKARDYGRW PEKPAGWRAV VERYSERLME LSCKLLGVLS EAMGLETESL AKACVDMDQK
201: VVVNFYPRCP QPELTLGVKR HTDPGTITLL LQDLVGGLQA TRDGGKTWIT VQPVSGAFVV NLGDHGHYLS NGRFKNADHR AVVNGESSRL SIATFQNPAP
301: DARVWPLAVK EGEETILEDP ITFAEMYRRK MEGDLDRASR KKQAKDQLN
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.