Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G345600.1 | Wheat | cytosol | 96.78 | 95.5 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 96.51 | 94.99 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 93.83 | 85.57 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 57.1 | 79.48 |
| Os01t0832600-01 | Rice | cytosol | 77.21 | 78.69 |
| Zm00001d042980_P002 | Maize | cytosol | 74.8 | 74.6 |
| EES01705 | Sorghum | cytosol | 75.6 | 72.68 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 30.56 | 62.3 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 59.52 | 62.01 |
| KRH38051 | Soybean | cytosol, peroxisome | 31.9 | 61.34 |
| Bra034168.1-P | Field mustard | cytosol | 45.84 | 59.17 |
| Zm00001d012456_P004 | Maize | plastid | 74.8 | 59.11 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 55.5 | 58.81 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 56.03 | 58.22 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 54.96 | 57.91 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 57.1 | 57.88 |
| KRH31155 | Soybean | cytosol | 54.96 | 56.79 |
| Solyc03g096050.2.1 | Tomato | cytosol | 53.89 | 56.3 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 53.89 | 56.15 |
| KRG97722 | Soybean | cytosol | 54.16 | 55.96 |
| PGSC0003DMT400031149 | Potato | cytosol | 53.35 | 55.9 |
| Solyc10g076660.1.1 | Tomato | cytosol | 54.69 | 55.89 |
| PGSC0003DMT400049192 | Potato | cytosol | 54.69 | 55.74 |
| CDY04960 | Canola | cytosol | 55.5 | 55.65 |
| Bra028752.1-P | Field mustard | cytosol | 55.5 | 55.65 |
| KRH00254 | Soybean | plastid | 51.74 | 55.46 |
| KRH14938 | Soybean | cytosol | 53.62 | 55.4 |
| AT5G05600.1 | Thale cress | cytosol | 54.96 | 55.26 |
| CDY11329 | Canola | cytosol | 54.42 | 54.57 |
| Bra005860.1-P | Field mustard | cytosol | 54.42 | 54.57 |
| CDX80966 | Canola | cytosol | 54.16 | 54.3 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 55.76 | 54.17 |
| CDY02966 | Canola | cytosol | 52.81 | 54.12 |
| AT3G55970.1 | Thale cress | cytosol | 52.55 | 53.99 |
| Bra000045.1-P | Field mustard | plastid | 50.94 | 53.82 |
| CDY07746 | Canola | plastid | 50.94 | 53.82 |
| Bra014716.1-P | Field mustard | cytosol | 52.55 | 53.55 |
| CDY14476 | Canola | plastid | 50.67 | 53.54 |
| KRH65721 | Soybean | cytosol | 53.35 | 53.35 |
| CDX76068 | Canola | cytosol | 52.28 | 53.28 |
| CDY18399 | Canola | plastid | 50.4 | 53.11 |
| Bra017132.1-P | Field mustard | plastid | 50.4 | 53.11 |
| CDX93319 | Canola | plastid | 50.13 | 52.97 |
| CDY68873 | Canola | plastid | 50.13 | 52.97 |
| KRH73197 | Soybean | cytosol | 53.62 | 52.91 |
| KRH49391 | Soybean | cytosol | 53.89 | 52.62 |
| AT2G38240.1 | Thale cress | plastid | 49.33 | 52.12 |
| PGSC0003DMT400028828 | Potato | cytosol | 49.6 | 51.39 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 49.06 | 50.0 |
| Solyc10g085190.1.1 | Tomato | cytosol | 48.26 | 49.86 |
| AT3G11180.2 | Thale cress | cytosol | 53.08 | 49.13 |
| Solyc10g076670.1.1 | Tomato | cytosol | 28.69 | 47.98 |
| CDY08545 | Canola | cytosol | 50.67 | 46.67 |
| CDY01001 | Canola | cytosol | 50.67 | 46.67 |
| Bra034861.1-P | Field mustard | cytosol | 50.67 | 46.67 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 35.12 | 39.22 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 34.05 | 39.2 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 34.85 | 38.24 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 31.64 | 38.19 |
| CDX72185 | Canola | nucleus | 50.4 | 37.3 |
| TraesCS7B01G020000.1 | Wheat | plastid | 34.58 | 37.28 |
| TraesCS2B01G412900.1 | Wheat | plastid | 34.85 | 37.25 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 31.9 | 35.42 |
| TraesCS7B01G063700.1 | Wheat | plastid | 30.83 | 34.43 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 31.64 | 33.81 |
| TraesCS6B01G318000.1 | Wheat | plastid | 30.56 | 33.53 |
| TraesCS6B01G318100.1 | Wheat | plastid | 30.56 | 33.24 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 31.64 | 32.78 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 30.03 | 32.09 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 29.76 | 31.9 |
| TraesCS4B01G003300.1 | Wheat | plastid | 32.44 | 31.27 |
| TraesCS2B01G521500.1 | Wheat | golgi | 31.64 | 31.22 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 28.95 | 31.21 |
| TraesCS6B01G046800.1 | Wheat | plastid | 28.95 | 31.21 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 28.15 | 30.61 |
| Bra007204.1-P | Field mustard | cytosol | 50.67 | 30.43 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 26.54 | 30.28 |
| CDY27251 | Canola | nucleus | 50.13 | 30.11 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 26.27 | 29.88 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 21.45 | 29.63 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.9 | 29.46 |
| TraesCS6B01G048100.1 | Wheat | plastid | 26.01 | 29.13 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 27.08 | 29.02 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 26.81 | 28.74 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 33.51 | 28.41 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 24.4 | 27.08 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 25.47 | 26.46 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 27.08 | 25.57 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G383900.1 | EnsemblPlantsGene:TraesCS3B01G383900 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF238 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr3B:+:603830335..603833538
Molecular Weight (calculated)
41250.9 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.287
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MADCMQEWPE PIVRVQAVAE SGLAAIPGCY VKPQRDRPAQ QHLAAAGNVL HEPSDDSIPV IDLSELLAAD DGRIDGLITE AVAAACRDWG FFQVVNHGVA
101: PELMRAVREA WRGFFRLPIS AKQQYANQPR TYEGYGSRVG VQKGGPLDWG DYYFLHLAPE AAKSPDKYWP TNPGICKEVS EEYGREVTRL CEVLMTVLSA
201: SLGLEEARFQ EEFGGAECGA CLRANYYPRC PQPDLTLGLS AHSDPGVLTV LLADEHVRGL QVRRADGEWV TVQPVRDDAF IVNVGDQIQI LSNSVYKSVE
301: HRVIVNAKEE RISLALFYNP RGDVPIAPAA ELVTPDRPSL YPPMTFDEYR VYIRKNGPRG KAQLEGFKGQ AVN
101: PELMRAVREA WRGFFRLPIS AKQQYANQPR TYEGYGSRVG VQKGGPLDWG DYYFLHLAPE AAKSPDKYWP TNPGICKEVS EEYGREVTRL CEVLMTVLSA
201: SLGLEEARFQ EEFGGAECGA CLRANYYPRC PQPDLTLGLS AHSDPGVLTV LLADEHVRGL QVRRADGEWV TVQPVRDDAF IVNVGDQIQI LSNSVYKSVE
301: HRVIVNAKEE RISLALFYNP RGDVPIAPAA ELVTPDRPSL YPPMTFDEYR VYIRKNGPRG KAQLEGFKGQ AVN
001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
Arabidopsis Description
Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.