Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034168.1-P | Field mustard | cytosol | 58.81 | 82.01 |
| AT5G05600.1 | Thale cress | cytosol | 68.24 | 74.12 |
| CDY01001 | Canola | cytosol | 74.44 | 74.07 |
| CDY08545 | Canola | cytosol | 73.95 | 73.58 |
| Bra034861.1-P | Field mustard | cytosol | 73.7 | 73.33 |
| KRH14938 | Soybean | cytosol | 59.55 | 66.48 |
| KRG97722 | Soybean | cytosol | 59.31 | 66.2 |
| KRH31155 | Soybean | cytosol | 57.82 | 64.54 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 56.33 | 63.23 |
| KRH73197 | Soybean | cytosol | 59.31 | 63.23 |
| AT3G55970.1 | Thale cress | cytosol | 56.82 | 63.09 |
| Solyc03g096050.2.1 | Tomato | cytosol | 55.58 | 62.75 |
| PGSC0003DMT400031149 | Potato | cytosol | 54.34 | 61.52 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 50.87 | 58.24 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 50.87 | 57.91 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.39 | 54.47 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.39 | 54.47 |
| EES18946 | Sorghum | cytosol | 49.38 | 54.37 |
| Os01t0832600-01 | Rice | cytosol | 49.13 | 54.1 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 47.89 | 53.91 |
| AT2G38240.1 | Thale cress | plastid | 46.9 | 53.54 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 47.89 | 53.17 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 49.13 | 53.08 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 49.88 | 53.03 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 49.63 | 52.91 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 48.14 | 52.72 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 48.14 | 52.72 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 48.14 | 52.29 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 47.64 | 52.17 |
| Zm00001d042980_P002 | Maize | cytosol | 48.39 | 52.14 |
| Zm00001d028744_P001 | Maize | cytosol | 48.64 | 52.13 |
| EES01705 | Sorghum | cytosol | 49.88 | 51.8 |
| Os05t0127500-01 | Rice | cytosol | 47.15 | 51.63 |
| EER92419 | Sorghum | cytosol | 48.39 | 50.91 |
| Os03t0289800-01 | Rice | cytosol | 48.39 | 50.39 |
| Zm00001d035462_P001 | Maize | cytosol | 47.64 | 50.26 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 32.75 | 49.25 |
| Zm00001d047744_P001 | Maize | mitochondrion | 48.88 | 48.4 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 48.39 | 47.68 |
| Zm00001d012456_P004 | Maize | plastid | 49.13 | 41.95 |
| AT5G08640.1 | Thale cress | cytosol | 29.53 | 35.42 |
| AT5G24530.1 | Thale cress | mitochondrion | 29.28 | 34.6 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 26.05 | 34.09 |
| AT4G22880.2 | Thale cress | cytosol | 29.78 | 33.71 |
| AT4G10490.1 | Thale cress | cytosol | 29.03 | 33.62 |
| AT3G60290.1 | Thale cress | cytosol, nucleus, peroxisome | 29.78 | 33.61 |
| AT4G10500.1 | Thale cress | plastid | 29.03 | 33.52 |
| AT4G16330.2 | Thale cress | plastid | 30.02 | 33.24 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 20.6 | 33.2 |
| AT2G36690.1 | Thale cress | cytosol, nucleus, peroxisome | 29.78 | 32.79 |
| AT2G44800.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 29.03 | 32.77 |
| AT3G51240.1 | Thale cress | cytosol | 28.78 | 32.4 |
| AT5G43935.1 | Thale cress | cytosol | 22.83 | 31.4 |
| AT5G07480.1 | Thale cress | cytosol | 27.05 | 30.62 |
| AT5G63600.2 | Thale cress | cytosol | 23.82 | 29.45 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 20.1 | 29.03 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EntrezGene:820289 | ProteinID:AEE75011.1 | ArrayExpress:AT3G11180 | EnsemblPlantsGene:AT3G11180 |
| RefSeq:AT3G11180 | TAIR:AT3G11180 | RefSeq:AT3G11180-TAIR-G | EnsemblPlants:AT3G11180.2 | TAIR:AT3G11180.2 | InterPro:DIOX_N |
| UniProt:F4J670 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016787 |
| GO:GO:0046872 | GO:GO:0055114 | GO:GO:0120091 | GO:GO:2000022 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | RefSeq:NP_001189858.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PO:PO:0000230 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009046 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF134 | SUPFAM:SSF51197 |
| UniParc:UPI0001E92E8C | : | : | : | : | : |
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
Coordinates
chr3:+:3504204..3507057
Molecular Weight (calculated)
46168.0 Da
IEP (calculated)
5.338
GRAVY (calculated)
-0.533
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGYRSY GSLKNYLEIP
401: KDW
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGYRSY GSLKNYLEIP
401: KDW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.