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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038447.1-P Field mustard cytosol, nucleus, peroxisome 73.9 78.66
CDY34450 Canola cytosol 73.9 78.66
CDY32234 Canola cytosol, nucleus, peroxisome 73.63 78.36
Solyc10g005120.1.1 Tomato cytosol 54.12 58.98
VIT_03s0017g02350.t01 Wine grape cytosol 56.87 58.31
GSMUA_Achr2P19210_001 Banana cytosol 55.77 58.17
KRG98061 Soybean mitochondrion, plastid 55.77 57.83
TraesCS7B01G020000.1 Wheat plastid 54.95 57.8
TraesCS7D01G119600.1 Wheat plastid 54.4 57.56
TraesCS7A01G121400.1 Wheat cytosol, peroxisome, plastid 54.67 57.51
HORVU7Hr1G025650.1 Barley cytosol 54.12 56.77
Os06t0162500-01 Rice cytosol 54.67 56.53
EER87904 Sorghum plastid 53.57 56.52
KRH30715 Soybean cytosol 55.77 55.31
Zm00001d045233_P002 Maize plastid 53.85 50.39
PGSC0003DMT400029386 Potato cytosol, nucleus, peroxisome 44.23 42.93
AT5G24530.1 Thale cress mitochondrion 32.69 34.9
AT5G63580.1 Thale cress cytoskeleton, cytosol, peroxisome 22.8 33.2
AT2G38240.1 Thale cress plastid 31.87 32.86
AT4G10500.1 Thale cress plastid 31.04 32.38
AT5G63590.1 Thale cress cytoskeleton, cytosol, peroxisome 26.92 31.82
AT5G05600.1 Thale cress cytosol 32.42 31.81
AT5G08640.1 Thale cress cytosol 29.12 31.55
AT3G55970.1 Thale cress cytosol 31.32 31.41
AT5G63600.2 Thale cress cytosol 27.75 30.98
AT4G10490.1 Thale cress cytosol 29.12 30.46
AT3G51240.1 Thale cress cytosol 29.95 30.45
AT4G22880.2 Thale cress cytosol 29.4 30.06
AT3G11180.2 Thale cress cytosol 33.24 30.02
AT5G63595.1 Thale cress cytoskeleton, cytosol, peroxisome 22.25 29.03
AT5G43935.1 Thale cress cytosol 23.35 29.01
AT3G60290.1 Thale cress cytosol, nucleus, peroxisome 27.75 28.29
AT2G44800.1 Thale cress cytosol, nucleus, peroxisome, plastid 27.75 28.29
AT5G07480.1 Thale cress cytosol 26.37 26.97
AT2G36690.1 Thale cress cytosol, nucleus, peroxisome 26.92 26.78
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:827327ProteinID:AEE83731.1ProteinID:AEE83732.1ArrayExpress:AT4G16330
EnsemblPlantsGene:AT4G16330RefSeq:AT4G16330TAIR:AT4G16330RefSeq:AT4G16330-TAIR-GEnsemblPlants:AT4G16330.2TAIR:AT4G16330.2
Unigene:At.4407InterPro:DIOX_NUniProt:F4JLS2GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0051213GO:GO:0055114InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443RefSeq:NP_001190740.1RefSeq:NP_567491.5InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF226SUPFAM:SSF51197UniParc:UPI0001E92F65
SEG:seg:::::
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
Coordinates
chr4:-:9226122..9227953
Molecular Weight (calculated)
40378.6 Da
IEP (calculated)
6.143
GRAVY (calculated)
-0.324
Length
364 amino acids
Sequence
(BLAST)
001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.