Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G119600.1 | Wheat | plastid | 82.95 | 84.88 |
| TraesCS7B01G020000.1 | Wheat | plastid | 83.24 | 84.68 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 83.24 | 84.68 |
| HORVU7Hr1G025650.1 | Barley | cytosol | 83.24 | 84.44 |
| EER87904 | Sorghum | plastid | 82.1 | 83.77 |
| Zm00001d045233_P002 | Maize | plastid | 82.95 | 75.06 |
| GSMUA_Achr2P19210_001 | Banana | cytosol | 69.32 | 69.91 |
| KRG98061 | Soybean | mitochondrion, plastid | 61.65 | 61.82 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 61.93 | 61.41 |
| Bra038447.1-P | Field mustard | cytosol, nucleus, peroxisome | 59.66 | 61.4 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 59.66 | 61.4 |
| CDY34450 | Canola | cytosol | 59.38 | 61.11 |
| Solyc10g005120.1.1 | Tomato | cytosol | 56.82 | 59.88 |
| KRH30715 | Soybean | cytosol | 61.65 | 59.13 |
| AT4G16330.2 | Thale cress | plastid | 56.53 | 54.67 |
| PGSC0003DMT400029386 | Potato | cytosol, nucleus, peroxisome | 46.88 | 44.0 |
| Os01t0832600-01 | Rice | cytosol | 39.77 | 38.25 |
| Os02t0767300-01 | Rice | cytosol | 33.52 | 35.65 |
| Os05t0127500-01 | Rice | cytosol | 36.65 | 35.05 |
| Os03t0122300-01 | Rice | cytosol | 32.39 | 33.33 |
| Os07t0169600-01 | Rice | plastid | 31.82 | 32.94 |
| Os04t0581100-01 | Rice | cytosol, peroxisome, plastid | 32.67 | 32.67 |
| Os04t0581000-01 | Rice | cytosol | 31.25 | 32.35 |
| Os03t0289800-01 | Rice | cytosol | 34.38 | 31.27 |
| Os01t0372500-00 | Rice | cytosol | 31.25 | 29.33 |
| Os08t0480200-01 | Rice | cytosol | 27.56 | 28.78 |
| Os06t0626700-00 | Rice | cytosol | 30.4 | 28.69 |
| Os09t0570800-01 | Rice | cytosol | 30.4 | 28.61 |
| Os04t0667400-01 | Rice | plastid | 26.99 | 28.53 |
| Os04t0667200-01 | Rice | cytosol | 25.28 | 27.3 |
| Os08t0560000-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 30.68 | 26.6 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 25.85 | 22.41 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.57 | 0.32 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EMBL:AK100178 | ProteinID:BAA81862.1 | ProteinID:BAF18803.1 | ProteinID:BAS96299.1 |
| InterPro:DIOX_N | ProteinID:EAZ35919.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| EnsemblPlantsGene:Os06g0162500 | EnsemblPlants:Os06t0162500-01 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF226 | UniProt:Q9XIW9 | SUPFAM:SSF51197 | UniParc:UPI00000A95C1 | SEG:seg |
Description
Similar to Naringenin 3-dioxygenase like protein. (Os06t0162500-01)
Coordinates
chr6:+:3145477..3147598
Molecular Weight (calculated)
38636.8 Da
IEP (calculated)
5.877
GRAVY (calculated)
-0.271
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: METAAAAPPR VQALADAGVS FLPAQYVQPP ELRPDPTTTT HRRAPTAASL SVPVVDLSSP GAGDAVRRAC AEWGAFHVVG HGVRPGLLDA MRGAGLAFFR
101: SPMEEKLRFA CDQARGAAAE GYGSRMLAND DSVLDWRDYF DHHTLPDSRR DPTRWPDFVP GYRDTVVKYS DSMKDLAQKL LRIVSESLNL PPSYIEEAVG
201: EVYQNITVSY YSPCPQPDLA LGLQSHSDMG AITLLIQDDV GGLEVLKDGL WIPVPSLPDG ILVILADQTE IITNGRYKSA VHRAIVNADR ARLSVATFYD
301: PSKSRKICTA PQLVCKEHPQ KYRDVIYGDY VSSWYSKGPE GKRNIDALLI EQ
101: SPMEEKLRFA CDQARGAAAE GYGSRMLAND DSVLDWRDYF DHHTLPDSRR DPTRWPDFVP GYRDTVVKYS DSMKDLAQKL LRIVSESLNL PPSYIEEAVG
201: EVYQNITVSY YSPCPQPDLA LGLQSHSDMG AITLLIQDDV GGLEVLKDGL WIPVPSLPDG ILVILADQTE IITNGRYKSA VHRAIVNADR ARLSVATFYD
301: PSKSRKICTA PQLVCKEHPQ KYRDVIYGDY VSSWYSKGPE GKRNIDALLI EQ
001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.