Factsheet for VIT_03s0017g02350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005120.1.1	Tomato	cytosol	63.38	67.37
KRG98061	Soybean	mitochondrion, plastid	66.48	67.24
KRH30715	Soybean	cytosol	67.04	64.85
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	61.41	63.74
CDY34450	Canola	cytosol	61.41	63.74
CDY32234	Canola	cytosol, nucleus, peroxisome	61.13	63.45
GSMUA_Achr2P19210_001	Banana	cytosol	61.97	63.04
Os06t0162500-01	Rice	cytosol	61.41	61.93
TraesCS7D01G119600.1	Wheat	plastid	59.15	61.05
TraesCS7B01G020000.1	Wheat	plastid	59.44	60.98
HORVU7Hr1G025650.1	Barley	cytosol	59.44	60.81
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	58.87	60.4
EER87904	Sorghum	plastid	58.31	60.0
AT4G16330.2	Thale cress	plastid	58.31	56.87
Zm00001d045233_P002	Maize	plastid	58.59	53.47
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	51.83	49.07
VIT_08s0105g00380.t01	Wine grape	cytosol	38.03	37.71
VIT_13s0067g01020.t01	Wine grape	cytosol	38.03	37.6
VIT_18s0001g03430.t01	Wine grape	cytosol	34.37	36.75
VIT_15s0048g02430.t01	Wine grape	cytosol	34.37	35.47
VIT_18s0001g03470.t01	Wine grape	cytosol	32.11	35.4
VIT_13s0047g00210.t01	Wine grape	cytosol	33.52	35.31
VIT_16s0013g00730.t01	Wine grape	cytosol	19.72	35.0
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	32.96	34.62
VIT_02s0025g02960.t01	Wine grape	cytosol	33.8	34.48
VIT_18s0001g03490.t01	Wine grape	cytosol	32.39	34.33
VIT_02s0025g02970.t01	Wine grape	cytosol	33.52	34.2
VIT_04s0023g03370.t01	Wine grape	cytosol	34.08	33.33
VIT_18s0001g06690.t01	Wine grape	cytosol	31.27	33.04
VIT_18s0001g14310.t01	Wine grape	cytosol	33.24	32.96
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	31.27	32.55
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	31.55	31.55
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	31.27	31.27
VIT_03s0017g00620.t01	Wine grape	cytosol	30.42	30.68
VIT_08s0007g04540.t01	Wine grape	cytosol	32.39	30.5
VIT_00s0250g00090.t01	Wine grape	cytosol	32.11	30.48
VIT_03s0017g00710.t01	Wine grape	plastid	28.73	29.39
VIT_03s0017g00830.t01	Wine grape	plastid	30.7	20.11
VIT_18s0001g03510.t01	Wine grape	cytosol	32.96	17.21

Protein Annotations

EntrezGene:100248395	wikigene:100248395	Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CCB58064	ProteinID:CCB58064.1
InterPro:DIOX_N	UniProt:F6HTQ3	EMBL:FN596248	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100248395	wikigene:LOC100248395	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF226	SUPFAM:SSF51197	UniParc:UPI00015CB582
ArrayExpress:VIT_03s0017g02350	EnsemblPlantsGene:VIT_03s0017g02350	EnsemblPlants:VIT_03s0017g02350.t01	RefSeq:XP_002263131	RefSeq:XP_002263131.2	RefSeq:XP_019074685.1
RefSeq:XP_019074686.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:19173376..19192591

Molecular Weight (calculated)

39536.9 Da

IEP (calculated)

5.372

GRAVY (calculated)

-0.298

Length

355 amino acids

Sequence
(BLAST)

001: MEVVVGEPTR VQTLAEKNPT QVPPEYIQAP ENRPQIKIPT TEDNTSSTVP VIDLFGFDPD HWGDVRRELG QACKEWGAFQ VTNHGVPFHL LHRMRSVGLS
101: FFKDSPMSHK LSYACPPGSA ASEGYGSRML VSTSNDTVLD WRDFFDHHTL PLSRRNPSRW PDFPPNYREV VVEYSDCMKA LAQKLLAFMS ESLGLPSSCI
201: EDAVGDFYQN ITVSYYPPCP QPELTLGLQS HSDMGAITLL IQDDVGGLQV LKDGEWVMVQ PLSDAIVVIL ADQTEIITNG NYRSAQHRAI ANANKARLSV
301: ATFHDPAKTM KISPASALVT ESFPPRYCQI VYGEYVSSWY TKGPEGKRNI DALML

Best Arabidopsis Sequence Match ( AT4G16330.2 )
(BLAST)

001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.