Factsheet for VIT_00s0250g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070302	Potato	cytosol	68.72	69.65
Solyc11g007890.1.1	Tomato	cytosol	68.98	68.98
VIT_08s0007g04540.t01	Wine grape	cytosol	68.72	68.17
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	63.37	64.75
CDX75020	Canola	cytosol	62.3	63.32
Bra017227.1-P	Field mustard	cytosol	62.03	63.22
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	60.43	59.32
GSMUA_Achr9P23620_001	Banana	cytosol	58.56	57.94
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	49.2	56.62
TraesCS7D01G279500.1	Wheat	cytosol	52.41	51.31
EES15170	Sorghum	cytosol	55.35	50.24
Zm00001d049926_P001	Maize	cytosol	54.01	50.12
TraesCS4A01G311000.1	Wheat	cytosol	48.13	48.65
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	51.34	48.0
EER96378	Sorghum	cytosol	50.53	47.97
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.14	47.79
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.6	47.77
Os09t0570800-01	Rice	cytosol	47.33	47.33
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	51.34	47.29
EES08336	Sorghum	cytosol	50.0	47.22
TraesCS4D01G002800.1	Wheat	cytosol, plastid	49.2	47.06
TraesCS4B01G003300.1	Wheat	plastid	48.4	46.77
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.55	46.36
HORVU4Hr1G000050.3	Barley	plastid	48.66	45.05
VIT_16s0013g00730.t01	Wine grape	cytosol	23.53	44.0
Zm00001d052999_P001	Maize	cytosol	48.4	40.86
VIT_13s0047g00210.t01	Wine grape	cytosol	36.1	40.06
VIT_15s0048g02430.t01	Wine grape	cytosol	35.29	38.37
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	34.49	38.17
VIT_18s0001g06690.t01	Wine grape	cytosol	33.69	37.5
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	35.29	37.18
VIT_02s0025g02970.t01	Wine grape	cytosol	34.49	37.07
VIT_03s0017g00620.t01	Wine grape	cytosol	34.22	36.36
VIT_02s0025g02960.t01	Wine grape	cytosol	33.42	35.92
VIT_08s0105g00380.t01	Wine grape	cytosol	33.42	34.92
VIT_03s0017g00710.t01	Wine grape	plastid	32.35	34.87
VIT_18s0001g03430.t01	Wine grape	cytosol	29.95	33.73
VIT_18s0001g03470.t01	Wine grape	cytosol	28.61	33.23
VIT_13s0067g01020.t01	Wine grape	cytosol	31.82	33.15
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	29.41	32.26
VIT_18s0001g03490.t01	Wine grape	cytosol	28.88	32.24
VIT_03s0017g02350.t01	Wine grape	cytosol	30.48	32.11
VIT_18s0001g14310.t01	Wine grape	cytosol	29.68	31.01
VIT_04s0023g03370.t01	Wine grape	cytosol	29.95	30.85
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	27.81	29.3
VIT_03s0017g00830.t01	Wine grape	plastid	33.69	23.25
VIT_18s0001g03510.t01	Wine grape	cytosol	29.41	16.18

Protein Annotations

EntrezGene:100252986	wikigene:100252986	MapMan:11.6.3.3	Gene3D:2.60.120.330	ProteinID:CBI23435	ProteinID:CBI23435.3
UniProt:D7SYX8	InterPro:DIOX_N	EMBL:FN595263	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100252986	wikigene:LOC100252986	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224	SUPFAM:SSF51197
UniParc:UPI00015C963C	ArrayExpress:VIT_00s0250g00090	EnsemblPlantsGene:VIT_00s0250g00090	EnsemblPlants:VIT_00s0250g00090.t01	RefSeq:XP_002270667	RefSeq:XP_002270667.1

Description

No Description!

Coordinates

chrUn:+:17381272..17383051

Molecular Weight (calculated)

42250.1 Da

IEP (calculated)

6.601

GRAVY (calculated)

-0.436

Length

374 amino acids

Sequence
(BLAST)

001: MSPAMSTAIE ANKEGDQPES QYQKGVKHLW DSGITRVPNK YILPASDRPG LTRDDNQSGN PNLKLPVIDF AHLQGSNRSH ALNTLAKACE EYGFFQLTNH
101: GIPSEVILNM VEGSKRFFEL PFEERSKYMS TDMYAPVRYG TSFNQNKDRV FCWRDFLKLS CQPLSGVLPF WPSSPVDFRQ SAVDYSKQAK FLYLALTEAI
201: LESLGLVEAT TKNNEYDSLK EFQDGSQLIV VNCYPSCPEP DLTLGMPPHS DYGFLTLLLQ DEVKGLQIQH DGRWVTVEPI PNSFVVNVGD HLEIFSNGRY
301: KSVLHRVLVN PLNSRISIAS LHSLPVNKTV QPSPKLIDET NPRRYKDTNF ASFLDYISSC EPKGKNFLES RKLT

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.