Factsheet for VIT_13s0067g01020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97722	Soybean	cytosol	73.82	73.41
KRH31155	Soybean	cytosol	72.7	72.3
KRH14938	Soybean	cytosol	72.14	71.75
PGSC0003DMT400031149	Potato	cytosol	71.03	71.63
Solyc03g096050.2.1	Tomato	cytosol	70.19	70.59
Bra034168.1-P	Field mustard	cytosol	55.43	68.86
VIT_08s0105g00380.t01	Wine grape	cytosol	68.25	68.44
KRH73197	Soybean	cytosol	71.59	67.99
Bra005860.1-P	Field mustard	cytosol	68.8	66.4
CDY11329	Canola	cytosol	68.8	66.4
CDX80966	Canola	cytosol	68.8	66.4
CDY04960	Canola	cytosol	67.97	65.59
AT5G05600.1	Thale cress	cytosol	67.41	65.23
Bra028752.1-P	Field mustard	cytosol	67.41	65.05
GSMUA_Achr6P15610_001	Banana	cytosol	63.23	64.49
AT3G55970.1	Thale cress	cytosol	64.9	64.19
CDY14105	Canola	cytosol, nucleus, peroxisome	68.52	64.06
Bra014716.1-P	Field mustard	cytosol	64.9	63.66
CDY02966	Canola	cytosol	64.35	63.46
CDX76068	Canola	cytosol	64.62	63.39
GSMUA_Achr7P15540_001	Banana	cytosol	59.61	60.45
EES18946	Sorghum	cytosol	60.72	59.56
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	59.05	59.22
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	58.77	58.94
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	58.77	58.94
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	58.5	57.85
Os05t0127500-01	Rice	cytosol	57.94	56.52
TraesCS3A01G351400.2	Wheat	cytosol	59.61	56.46
AT3G11180.2	Thale cress	cytosol	63.23	56.33
TraesCS3D01G345600.1	Wheat	cytosol	59.05	56.08
TraesCS3B01G383900.1	Wheat	cytosol	58.22	56.03
Os01t0832600-01	Rice	cytosol	57.1	56.01
TraesCS4B01G195000.1	Wheat	cytosol	57.38	55.98
TraesCS4A01G109200.1	Wheat	cytosol	57.1	55.71
TraesCS4D01G195700.1	Wheat	cytosol	56.82	55.43
Zm00001d028744_P001	Maize	cytosol	57.66	55.05
EES01705	Sorghum	cytosol	59.33	54.9
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	56.55	54.72
Zm00001d035462_P001	Maize	cytosol	58.22	54.71
Zm00001d042980_P002	Maize	cytosol	56.82	54.55
Bra034861.1-P	Field mustard	cytosol	60.17	53.33
CDY08545	Canola	cytosol	60.17	53.33
CDY01001	Canola	cytosol	59.89	53.09
EER92419	Sorghum	cytosol	56.55	53.0
Os03t0289800-01	Rice	cytosol	56.82	52.71
TraesCS4B01G328300.1	Wheat	cytosol	39.0	52.24
Zm00001d047744_P001	Maize	mitochondrion	57.94	51.11
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	58.22	51.1
CDX72185	Canola	nucleus	64.07	45.63
Zm00001d012456_P004	Maize	plastid	57.66	43.86
VIT_18s0001g03430.t01	Wine grape	cytosol	37.05	40.06
VIT_13s0047g00210.t01	Wine grape	cytosol	36.49	38.87
VIT_18s0001g03470.t01	Wine grape	cytosol	34.82	38.82
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	36.49	38.76
VIT_03s0017g02350.t01	Wine grape	cytosol	37.6	38.03
VIT_15s0048g02430.t01	Wine grape	cytosol	35.93	37.5
VIT_02s0025g02960.t01	Wine grape	cytosol	36.21	37.36
VIT_18s0001g03490.t01	Wine grape	cytosol	34.82	37.31
Bra007204.1-P	Field mustard	cytosol	64.35	37.2
VIT_02s0025g02970.t01	Wine grape	cytosol	35.65	36.78
CDY27251	Canola	nucleus	63.51	36.72
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	35.38	35.77
VIT_04s0023g03370.t01	Wine grape	cytosol	35.65	35.26
VIT_18s0001g14310.t01	Wine grape	cytosol	34.82	34.92
VIT_16s0013g00730.t01	Wine grape	cytosol	19.22	34.5
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	31.48	33.14
VIT_18s0001g06690.t01	Wine grape	cytosol	30.64	32.74
VIT_03s0017g00620.t01	Wine grape	cytosol	32.03	32.67
VIT_08s0007g04540.t01	Wine grape	cytosol	34.26	32.63
VIT_03s0017g00710.t01	Wine grape	plastid	31.2	32.28
VIT_00s0250g00090.t01	Wine grape	cytosol	33.15	31.82
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	30.08	30.42
VIT_03s0017g00830.t01	Wine grape	plastid	32.87	21.77
VIT_18s0001g03510.t01	Wine grape	cytosol	34.26	18.09

Protein Annotations

EntrezGene:100245030	wikigene:100245030	Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A5AZG3	EMBL:AM441299
ProteinID:CAN59837	ProteinID:CAN59837.1	ProteinID:CBI25470	ProteinID:CBI25470.3	InterPro:DIOX_N	EMBL:FN595514
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100245030
wikigene:LOC100245030	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI000151FE69	ArrayExpress:VIT_13s0067g01020	EnsemblPlantsGene:VIT_13s0067g01020
EnsemblPlants:VIT_13s0067g01020.t01	RefSeq:XP_002272995	RefSeq:XP_002272995.1	RefSeq:XP_019079533.1	:	:

Description

No Description!

Coordinates

chr13:-:584436..586234

Molecular Weight (calculated)

40842.0 Da

IEP (calculated)

6.186

GRAVY (calculated)

-0.338

Length

359 amino acids

Sequence
(BLAST)

001: MNCPQDWPEP IVRVQSLSDS GVAVIPDQYI KPSMERPEGF SENTQTNIPV IDLEGLFDDQ HGLMLNSSII ELIYQACREW GFFQVVNHGV SPDLMDQARE
101: VWRDFFHLPM EMKQVYANSP KTYEGYGSRL GVEKGAILDW SDYYFLHYRP SSLKDHNKWP SPPLALREVI EEYGKQVVEL AGKLMKVLSI NLGLKEEYLQ
201: NAFGGDDIGA CLRVNFYPRC PQPDLTLGLS SHSDPGGMTF LLPDHDVPGL QVRKDHKWIT VKPAPHAFIV NIGDQIQVLS NAIYKSVEHR VMVNSLKERV
301: SLAFFYNPKS DILIEPVKAL VTPDTPALYP GMTFDQYRLY IRMRGPRGKS QVESLKSPR

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.