Factsheet for GSMUA_Achr6P15610_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15540_001	Banana	cytosol	70.45	70.06
GSMUA_Achr11P...	Banana	cytosol	63.92	67.98
GSMUA_Achr5P29330_001	Banana	cytosol	67.33	66.76
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	34.66	66.67
EES18946	Sorghum	cytosol	67.9	65.3
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	65.34	64.25
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	65.06	63.97
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	64.77	63.69
KRH38051	Soybean	cytosol, peroxisome	34.94	63.4
VIT_13s0067g01020.t01	Wine grape	cytosol	64.49	63.23
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	65.06	63.09
KRH14938	Soybean	cytosol	64.49	62.88
KRG97722	Soybean	cytosol	64.2	62.6
Bra034168.1-P	Field mustard	cytosol	51.14	62.28
TraesCS4B01G195000.1	Wheat	cytosol	64.49	61.68
TraesCS4A01G109200.1	Wheat	cytosol	64.2	61.41
KRH31155	Soybean	cytosol	62.78	61.22
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	64.49	61.19
Zm00001d028744_P001	Maize	cytosol	65.34	61.17
Zm00001d035462_P001	Maize	cytosol	66.19	60.99
Os05t0127500-01	Rice	cytosol	63.64	60.87
TraesCS4D01G195700.1	Wheat	cytosol	63.64	60.87
PGSC0003DMT400031149	Potato	cytosol	61.08	60.39
GSMUA_Achr5P08490_001	Banana	cytosol	60.8	59.94
KRH73197	Soybean	cytosol	64.2	59.79
Solyc03g096050.2.1	Tomato	cytosol	60.51	59.66
EER92419	Sorghum	cytosol	64.77	59.53
Solyc10g076660.1.1	Tomato	cytosol	61.36	59.18
GSMUA_Achr9P04430_001	Banana	cytosol	55.97	59.16
VIT_08s0105g00380.t01	Wine grape	cytosol	59.94	58.94
Os01t0832600-01	Rice	cytosol	61.08	58.74
GSMUA_Achr10P...	Banana	cytosol	58.52	58.52
PGSC0003DMT400049192	Potato	cytosol	60.8	58.47
Os03t0289800-01	Rice	cytosol	63.64	57.88
KRH65721	Soybean	cytosol	60.51	57.1
Bra005860.1-P	Field mustard	cytosol	60.23	56.99
CDY11329	Canola	cytosol	60.23	56.99
Bra014716.1-P	Field mustard	cytosol	59.09	56.83
CDY04960	Canola	cytosol	59.94	56.72
CDY02966	Canola	cytosol	58.52	56.59
CDX76068	Canola	cytosol	58.81	56.56
Bra028752.1-P	Field mustard	cytosol	59.66	56.45
CDX80966	Canola	cytosol	59.66	56.45
AT5G05600.1	Thale cress	cytosol	59.38	56.33
Zm00001d042980_P002	Maize	cytosol	59.09	55.62
TraesCS3B01G383900.1	Wheat	cytosol	58.81	55.5
AT3G55970.1	Thale cress	cytosol	57.1	55.37
Zm00001d047744_P001	Maize	mitochondrion	63.92	55.28
GSMUA_Achr6P32920_001	Banana	cytosol	51.42	55.18
KRH00254	Soybean	plastid	54.55	55.17
EES01705	Sorghum	cytosol	60.8	55.15
CDY14105	Canola	cytosol, nucleus, peroxisome	59.94	54.95
TraesCS3A01G351400.2	Wheat	cytosol	59.09	54.88
TraesCS3D01G345600.1	Wheat	cytosol	58.81	54.76
PGSC0003DMT400028828	Potato	cytosol	55.97	54.72
AT2G38240.1	Thale cress	plastid	54.83	54.67
KRH49391	Soybean	cytosol	58.81	54.19
Bra000045.1-P	Field mustard	plastid	54.26	54.11
CDY07746	Canola	plastid	54.26	54.11
Solyc10g085190.1.1	Tomato	cytosol	55.4	54.02
CDY14476	Canola	plastid	53.98	53.82
CDX93319	Canola	plastid	53.69	53.54
CDY68873	Canola	plastid	53.69	53.54
Bra017132.1-P	Field mustard	plastid	53.69	53.39
CDY18399	Canola	plastid	53.69	53.39
Solyc10g076670.1.1	Tomato	cytosol	33.81	53.36
AT3G11180.2	Thale cress	cytosol	58.24	50.87
TraesCS4B01G328300.1	Wheat	cytosol	38.64	50.75
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	58.24	50.12
CDY08545	Canola	cytosol	56.25	48.89
CDY01001	Canola	cytosol	56.25	48.89
Bra034861.1-P	Field mustard	cytosol	56.25	48.89
Zm00001d012456_P004	Maize	plastid	60.51	45.13
GSMUA_Achr2P19210_001	Banana	cytosol	39.77	40.11
CDX72185	Canola	nucleus	55.97	39.09
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	37.22	38.87
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	36.36	37.98
GSMUA_Achr1P00770_001	Banana	cytosol	35.8	37.39
GSMUA_Achr3P07030_001	Banana	cytosol	35.23	37.24
GSMUA_Achr5P12830_001	Banana	cytosol	35.8	37.17
GSMUA_Achr10P...	Banana	cytosol	32.95	37.06
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	35.51	36.87
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	35.23	36.8
GSMUA_Achr8P23330_001	Banana	cytosol	34.66	36.64
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	35.23	36.36
GSMUA_Achr10P...	Banana	cytosol	34.09	35.82
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	35.51	35.41
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	36.36	32.82
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	33.52	32.78
GSMUA_Achr9P15020_001	Banana	cytosol	32.1	32.19
Bra007204.1-P	Field mustard	cytosol	56.25	31.88
CDY27251	Canola	nucleus	55.68	31.56
GSMUA_Achr9P23620_001	Banana	cytosol	33.81	31.48
GSMUA_Achr7P16780_001	Banana	cytosol	32.67	30.83
GSMUA_Achr2P02770_001	Banana	cytosol	32.1	30.38
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	32.1	29.66
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	26.14	28.31

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G15610_001
EnsemblPlants:GSMUA_Achr6P15610_001	EnsemblPlants:GSMUA_Achr6T15610_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0T7A9
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF92	SUPFAM:SSF51197	UniParc:UPI00029670E0	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15610_001]

Coordinates

chr6:-:10427107..10428918

Molecular Weight (calculated)

39108.0 Da

IEP (calculated)

5.662

GRAVY (calculated)

-0.132

Length

352 amino acids

Sequence
(BLAST)

001: MDCLRDWPEP VVRVQSLSDS GATTIPDRYV KPQSERASVD PGDMVGIPVV DLAMLTDDVA NCEATVTAIA DACRQWGFFQ AVNHGVSPGL MRGAREVWRG
101: FFHLPMDEKQ RYANSPKTYE GYGSRLGIER GAILDWGDYF FLHFLPLCLM DHDKWPALPP ALRETSDEYG AALTKLCRRL LRALSIGLGL DAACLPVAFD
201: DEGVCMRVNF YPRCPQPELT LGLSAHSDPG GMTVLLVDDH VTGLQVRKND SWITVQPVPD AFIVNVGDQI QVLSNAAYKS VEHRVMVNAA AERLSMAFFY
301: NPKSDVPIGP IRELVTCDRP ALYRPMTFDE YRLFIRKKGP RGKSQVDSLV AA

Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.