Factsheet for GSMUA_Achr5P12830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	80.53	80.53
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	77.58	78.04
GSMUA_Achr1P00770_001	Banana	cytosol	76.99	77.45
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	72.57	73.0
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	71.98	71.55
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	73.45	70.54
EER94585	Sorghum	cytosol	69.03	69.64
TraesCS4D01G341800.1	Wheat	cytosol	68.44	69.05
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	67.85	68.45
TraesCS4B01G346900.1	Wheat	cytosol	67.55	68.15
Zm00001d029744_P001	Maize	cytosol	66.96	67.56
EER92960	Sorghum	cytosol	66.67	67.26
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	66.67	67.06
Os03t0122300-01	Rice	cytosol	67.55	66.96
KRH53636	Soybean	cytosol	63.13	63.31
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	62.83	63.2
VIT_13s0047g00210.t01	Wine grape	cytosol	62.83	63.2
PGSC0003DMT400001570	Potato	cytosol	62.24	62.61
KRH64291	Soybean	cytosol	61.95	62.13
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	61.06	61.24
AT5G24530.1	Thale cress	mitochondrion	61.06	60.7
TraesCS5A01G515600.2	Wheat	cytosol	68.73	60.68
CDY05445	Canola	plastid	60.47	60.12
Bra029414.1-P	Field mustard	plastid	60.47	60.12
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	65.19	59.89
CDX80450	Canola	mitochondrion	60.18	59.82
CDX88109	Canola	mitochondrion	60.18	59.82
CDY05412	Canola	mitochondrion	59.88	59.53
PGSC0003DMT400069218	Potato	cytosol	59.59	59.06
Solyc06g073080.2.1	Tomato	plastid	54.28	57.5
Bra009771.1-P	Field mustard	mitochondrion	58.11	47.13
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	52.51	45.64
GSMUA_Achr5P08490_001	Banana	cytosol	39.23	37.25
GSMUA_Achr10P...	Banana	cytosol	38.05	36.65
GSMUA_Achr11P...	Banana	cytosol	35.4	36.25
GSMUA_Achr6P15610_001	Banana	cytosol	37.17	35.8
GSMUA_Achr9P15020_001	Banana	cytosol	36.87	35.61
GSMUA_Achr9P04430_001	Banana	cytosol	34.81	35.44
GSMUA_Achr7P15540_001	Banana	cytosol	36.87	35.31
GSMUA_Achr10P...	Banana	cytosol	32.45	35.14
GSMUA_Achr5P29330_001	Banana	cytosol	36.58	34.93
HORVU4Hr1G089330.2	Barley	plastid	44.54	34.71
GSMUA_Achr8P23330_001	Banana	cytosol	33.92	34.53
GSMUA_Achr6P32920_001	Banana	cytosol	33.33	34.45
GSMUA_Achr3P07030_001	Banana	cytosol	33.04	33.63
GSMUA_Achr2P19210_001	Banana	cytosol	34.51	33.52
GSMUA_Achr10P...	Banana	cytosol	33.04	33.43
GSMUA_Achr2P02770_001	Banana	cytosol	34.22	31.18
GSMUA_Achr9P23620_001	Banana	cytosol	34.51	30.95
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	34.51	30.71
GSMUA_Achr7P16780_001	Banana	cytosol	33.33	30.29
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	31.56	29.72
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	28.32	29.54

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G12830_001
EnsemblPlants:GSMUA_Achr5P12830_001	EnsemblPlants:GSMUA_Achr5T12830_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0SY12
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF389	SUPFAM:SSF51197	UniParc:UPI0002966F49	:	:	:

Description

Putative Naringenin,2-oxoglutarate 3-dioxygenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G12830_001]

Coordinates

chr5:+:9173377..9176877

Molecular Weight (calculated)

38946.5 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.413

Length

339 amino acids

Sequence
(BLAST)

001: MADQLLSAVS DYVSIPESYV RPESQRPRLN EVIRGANIPT IDLGSEDELQ IIAQVADACR SFGFFQVVNH GVPLESMQKM MAVASEFFRL PPEEKAKHYS
101: DDPAKKMRLS TSFNIKKETV RNWRDYLRLH CYPLEEFVPG EKHNNRPLFP WDVVSTYCRE VRRLGFRLLR AISLSLELEE GYMAKVLGEQ EQHMAVNYYP
201: KCPEPELTYG LQAHTDPNAL TVLLQDPNVA GLQVLKDGKW IAVNPQPDAL VINIGDQLQA LSNGRYRSVW HRAVVNSERE RISVASFLCP SSSVVISPPE
301: KLVGDRARPV YRTYTYDEYY KKFWSRNLDD DHCLKLFEC

Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.