Factsheet for Solyc03g080190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001570	Potato	cytosol	95.85	95.85
Solyc06g073080.2.1	Tomato	plastid	74.78	78.75
VIT_13s0047g00210.t01	Wine grape	cytosol	76.26	76.26
KRH64291	Soybean	cytosol	75.67	75.44
KRH53636	Soybean	cytosol	75.67	75.44
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	67.95	67.55
AT5G24530.1	Thale cress	mitochondrion	67.66	66.86
EER92960	Sorghum	cytosol	66.47	66.67
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	67.36	66.57
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	65.88	65.88
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	65.88	65.88
CDX88109	Canola	mitochondrion	66.17	65.4
CDX80450	Canola	mitochondrion	66.17	65.4
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	68.25	65.16
CDY05445	Canola	plastid	65.88	65.1
Bra029414.1-P	Field mustard	plastid	65.88	65.1
Os03t0122300-01	Rice	cytosol	65.88	64.91
TraesCS4D01G341800.1	Wheat	cytosol	64.69	64.88
CDY05412	Canola	mitochondrion	65.58	64.81
Os04t0581000-01	Rice	cytosol	65.28	64.71
TraesCS4B01G346900.1	Wheat	cytosol	64.09	64.29
KXG26978	Sorghum	cytosol	64.69	63.56
GSMUA_Achr1P00770_001	Banana	cytosol	63.5	63.5
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	63.5	63.5
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	63.2	63.39
GSMUA_Achr5P12830_001	Banana	cytosol	63.2	62.83
TraesCS2A01G395000.1	Wheat	cytosol	63.2	62.65
HORVU0Hr1G005300.1	Barley	cytosol	62.91	62.35
TraesCS2D01G392800.1	Wheat	cytosol	62.91	62.35
EER94585	Sorghum	cytosol	62.02	62.2
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	61.42	60.88
Zm00001d029744_P001	Maize	cytosol	59.94	60.12
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	65.28	59.62
TraesCS5A01G515600.2	Wheat	cytosol	64.09	56.25
Bra009771.1-P	Field mustard	mitochondrion	63.2	50.96
Solyc06g083910.2.1	Tomato	cytosol	40.65	40.65
Solyc02g070080.2.1	Tomato	cytosol	40.36	39.42
Solyc09g008560.2.1	Tomato	cytosol	41.25	36.77
Solyc11g010410.1.1	Tomato	cytosol	36.2	36.31
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	32.94	36.04
Solyc09g066310.2.1	Tomato	cytosol	34.72	35.56
Solyc11g010400.1.1	Tomato	cytosol	35.01	35.12
Solyc03g096050.2.1	Tomato	cytosol	37.09	35.01
Solyc11g007890.1.1	Tomato	cytosol	38.58	34.76
Solyc10g018190.1.1	Tomato	cytosol	33.53	34.56
Solyc10g018170.1.1	Tomato	cytosol	21.66	34.27
Solyc07g043420.2.1	Tomato	cytosol	34.42	33.92
HORVU4Hr1G089330.2	Barley	plastid	43.62	33.79
Solyc02g083860.2.1	Tomato	cytosol	36.2	33.7
Solyc11g013110.1.1	Tomato	cytosol, plastid	35.01	33.52
Solyc10g076660.1.1	Tomato	cytosol	35.91	33.15
Solyc01g105660.2.1	Tomato	cytosol, plastid	35.01	33.05
Solyc10g005120.1.1	Tomato	cytosol	32.64	32.93
Solyc01g105650.2.1	Tomato	cytosol	34.72	32.87
Solyc06g073580.2.1	Tomato	cytosol	34.42	32.86
Solyc08g006770.2.1	Tomato	plastid	34.12	32.76
Solyc10g085190.1.1	Tomato	cytosol	35.01	32.69
Solyc07g054930.2.1	Tomato	cytosol, plastid	35.01	31.72
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	32.34	30.97
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	32.94	30.66
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	34.72	28.54
Solyc07g054870.2.1	Tomato	mitochondrion	34.12	28.4
Solyc01g090140.1.1	Tomato	plastid	18.4	27.68
Solyc10g076670.1.1	Tomato	cytosol	17.8	26.91
Solyc08g080040.2.1	Tomato	cytosol	27.89	22.49

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4BHZ5	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF371	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc03g080190.2	EnsemblPlants:Solyc03g080190.2.1
UniParc:UPI00018CBC44	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:52078938..52083877

Molecular Weight (calculated)

38369.7 Da

IEP (calculated)

5.648

GRAVY (calculated)

-0.389

Length

337 amino acids

Sequence
(BLAST)

001: METKVISSGI NHSTLPQSYI RPESDRPRLS EVVDCENVPI IDLSCGDQAQ IIRQIGEACQ TYGFFQVINH GVPKEVVEKM LGVAGEFFNL PVEEKLKLYS
101: DDPSKTMRLS TSFNVKKETV HNWRDYLRLH CYPLEKYAPE WPSNPSSFRE IVSRYCREIR QLGFRLEEAI AESLGLDKEC IKDVLGEQGQ HMAINYYPPC
201: PQPELTYGLP AHTDPNSLTI LLQDLQVAGL QVLKDGKWLA VKPQPDAFVI NLGDQLQAVS NGKYRSVWHR AIVNSDQARM SVASFLCPCD SAKISAPKLL
301: TEDGSPVIYQ DFTYAEYYNK FWSRNLDQQH CLELFKN

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.