Factsheet for Solyc07g054940.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
peroxisome 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013924	Potato	cytosol	25.61	88.98
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	77.07	87.29
Solyc07g054930.2.1	Tomato	cytosol, plastid	72.44	79.84
Solyc07g054870.2.1	Tomato	mitochondrion	71.22	72.1
Solyc01g105660.2.1	Tomato	cytosol, plastid	34.15	39.22
Solyc08g006770.2.1	Tomato	plastid	33.41	39.03
Solyc01g105650.2.1	Tomato	cytosol	33.17	38.2
Solyc06g073080.2.1	Tomato	plastid	27.8	35.62
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	28.54	34.72
Solyc09g008560.2.1	Tomato	cytosol	31.46	34.13
Solyc10g005120.1.1	Tomato	cytosol	27.32	33.53
Solyc02g070080.2.1	Tomato	cytosol	27.56	32.75
Solyc01g090140.1.1	Tomato	plastid	17.56	32.14
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	24.15	32.14
Solyc10g018190.1.1	Tomato	cytosol	25.12	31.5
Solyc06g083910.2.1	Tomato	cytosol	25.85	31.45
Solyc09g066310.2.1	Tomato	cytosol	25.12	31.31
Solyc10g085190.1.1	Tomato	cytosol	27.56	31.3
Solyc10g076660.1.1	Tomato	cytosol	27.8	31.23
Solyc11g013110.1.1	Tomato	cytosol, plastid	26.59	30.97
Solyc03g096050.2.1	Tomato	cytosol	26.83	30.81
Solyc07g043420.2.1	Tomato	cytosol	25.61	30.7
Solyc11g007890.1.1	Tomato	cytosol	27.8	30.48
Solyc10g018170.1.1	Tomato	cytosol	15.61	30.05
Solyc11g010400.1.1	Tomato	cytosol	24.15	29.46
Solyc11g010410.1.1	Tomato	cytosol	23.66	28.87
Solyc02g083860.2.1	Tomato	cytosol	25.12	28.45
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	23.17	26.99
Solyc10g076670.1.1	Tomato	cytosol	14.63	26.91
Solyc06g073580.2.1	Tomato	cytosol	22.2	25.78
Solyc08g080040.2.1	Tomato	cytosol	24.63	24.16

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4CG34	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc07g054940.1	EnsemblPlants:Solyc07g054940.1.1
UniParc:UPI000276C80B	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63089880..63091341

Molecular Weight (calculated)

46287.8 Da

IEP (calculated)

8.734

GRAVY (calculated)

-0.373

Length

410 amino acids

Sequence
(BLAST)

001: MCMYNATRPI APKTKNVTLG KEKVVKEHRF FRKNLINKAS SHPTAKLMAL IVTSSPFPTM EIDYKKGVKY LVENSKKMKM VPSQFVLPIP EDERPSLAIE
101: GSTPVIDLSG LNGTDEQRLS TIHAISSACA HWGFFMVSNH GIRTSIMDEM LKVVEEFFNL PLEEKMRYCS ENVMDPVIYG TSFNTTGKHA LHWRDFFRHY
201: GGLVPQSYHF WPDNPPTYKQ VAKEYLKEVW QLKIKIFRAI SEGLGLDPDF IERSLGDEGT QMIASNYYPT CPEPNKTLGL APHSDQSGLT ILMDNGVPGL
301: QIKHNQTWYS VPHVPGTFVV NLGDYLEILS NGKYKSVEHR AVVNAEAARV SIAVGHGPEM DTIVQPASPL IKEKSESKYR SIVYKDYVRA QQSTTKRGKV
401: TLDEIMNNNI

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.