Factsheet for Solyc07g054920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytoskeleton, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
plastid 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013924	Potato	cytosol	27.9	85.59
Solyc07g054930.2.1	Tomato	cytosol, plastid	81.77	79.57
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	87.29	77.07
Solyc07g054870.2.1	Tomato	mitochondrion	77.62	69.38
Solyc08g006770.2.1	Tomato	plastid	38.67	39.89
Solyc01g105650.2.1	Tomato	cytosol	38.67	39.33
Solyc01g105660.2.1	Tomato	cytosol, plastid	37.85	38.38
Solyc06g073080.2.1	Tomato	plastid	30.66	34.69
Solyc10g005120.1.1	Tomato	cytosol	31.77	34.43
Solyc09g008560.2.1	Tomato	cytosol	35.08	33.6
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	28.18	33.12
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	30.66	32.94
Solyc10g018190.1.1	Tomato	cytosol	29.01	32.11
Solyc10g018170.1.1	Tomato	cytosol	18.78	31.92
Solyc07g043420.2.1	Tomato	cytosol	29.56	31.29
Solyc02g070080.2.1	Tomato	cytosol	29.56	31.01
Solyc09g066310.2.1	Tomato	cytosol	28.18	31.0
Solyc10g076660.1.1	Tomato	cytosol	31.22	30.96
Solyc11g007890.1.1	Tomato	cytosol	31.77	30.75
Solyc10g085190.1.1	Tomato	cytosol	30.66	30.75
Solyc03g096050.2.1	Tomato	cytosol	30.11	30.53
Solyc06g083910.2.1	Tomato	cytosol	28.18	30.27
Solyc11g010400.1.1	Tomato	cytosol	27.9	30.06
Solyc11g013110.1.1	Tomato	cytosol, plastid	28.73	29.55
Solyc01g090140.1.1	Tomato	plastid	18.23	29.46
Solyc11g010410.1.1	Tomato	cytosol	27.35	29.46
Solyc02g083860.2.1	Tomato	cytosol	28.73	28.73
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	27.35	28.12
Solyc10g076670.1.1	Tomato	cytosol	16.57	26.91
Solyc06g073580.2.1	Tomato	cytosol	25.97	26.63
Solyc08g080040.2.1	Tomato	cytosol	29.01	25.12

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4CG32	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc07g054920.1	EnsemblPlants:Solyc07g054920.1.1
UniParc:UPI000276C809	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63072070..63073586

Molecular Weight (calculated)

40586.9 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.281

Length

362 amino acids

Sequence
(BLAST)

001: MALIVTSSPF PTMEIDYKKG AKYLVDNSKK MKMVPSQLVL PIPEGEKPSM AIDGSIPVID LSGLYGPDEQ RLSTIHAISS ACAEWGFFRV TNHGIKSSIM
101: DEMLKVIQEF FNLPLEDKMR YCSENVMDSV IYGTSFNATG KYALHWRDFF RHYGGLVPQS YHFWPDNPPT YKHVTKEYLK EVWQLAMKIF GAISQGLGLD
201: PDYIEKSLGD EGTQMMVANY YPTCPEPNKT LGLAPHSDMG ALTILMDSGI PGLQIKHNQT WYSVHHVPGT FVVNLGDFLE ILSNGKYKSA EHRVVVNAEA
301: ARISIAVGHG PKMNTIVQPA SPLIKEKSES KYRPIVYKDY VRAQQSTTKR GKVTLDEILN NN

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.