Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g054920.1.1 | Tomato | cytoskeleton, cytosol, peroxisome, plastid | 79.57 | 81.77 |
| Solyc07g054870.2.1 | Tomato | mitochondrion | 81.45 | 74.81 |
| Solyc07g054940.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 79.84 | 72.44 |
| Solyc08g006770.2.1 | Tomato | plastid | 38.98 | 41.31 |
| Solyc01g105650.2.1 | Tomato | cytosol | 38.71 | 40.45 |
| Solyc01g105660.2.1 | Tomato | cytosol, plastid | 38.71 | 40.34 |
| Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 31.72 | 35.01 |
| Solyc06g073080.2.1 | Tomato | plastid | 30.11 | 35.0 |
| Solyc09g008560.2.1 | Tomato | cytosol | 34.95 | 34.39 |
| Solyc01g090140.1.1 | Tomato | plastid | 20.43 | 33.93 |
| Solyc10g076660.1.1 | Tomato | cytosol | 31.99 | 32.6 |
| Solyc11g007890.1.1 | Tomato | cytosol | 32.26 | 32.09 |
| Solyc10g085190.1.1 | Tomato | cytosol | 30.91 | 31.86 |
| Solyc10g005120.1.1 | Tomato | cytosol | 28.23 | 31.44 |
| Solyc03g096050.2.1 | Tomato | cytosol | 29.84 | 31.09 |
| Solyc02g070080.2.1 | Tomato | cytosol | 28.76 | 31.01 |
| Solyc10g018190.1.1 | Tomato | cytosol | 27.15 | 30.89 |
| Solyc07g043420.2.1 | Tomato | cytosol | 28.23 | 30.7 |
| Solyc09g066310.2.1 | Tomato | cytosol | 26.88 | 30.4 |
| Solyc06g083910.2.1 | Tomato | cytosol | 27.42 | 30.27 |
| Solyc09g066320.1.1 | Tomato | cytosol, nucleus, peroxisome | 25.0 | 30.19 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 28.23 | 29.83 |
| Solyc10g018170.1.1 | Tomato | cytosol | 16.67 | 29.11 |
| Solyc11g010400.1.1 | Tomato | cytosol | 26.08 | 28.87 |
| Solyc11g010410.1.1 | Tomato | cytosol | 25.54 | 28.27 |
| Solyc10g076670.1.1 | Tomato | cytosol | 16.67 | 27.8 |
| Solyc02g083860.2.1 | Tomato | cytosol | 25.81 | 26.52 |
| Solyc11g072200.1.1 | Tomato | cytosol, peroxisome, plastid | 24.46 | 25.85 |
| Solyc06g073580.2.1 | Tomato | cytosol | 23.66 | 24.93 |
| Solyc08g080040.2.1 | Tomato | cytosol | 26.34 | 23.45 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | UniProt:K4CG33 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF224 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc07g054930.2 | EnsemblPlants:Solyc07g054930.2.1 |
| UniParc:UPI000276C80A | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:63078709..63080901
Molecular Weight (calculated)
41621.9 Da
IEP (calculated)
7.866
GRAVY (calculated)
-0.318
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MALITSSPSS SISTSISTNT ITTQIDYKKG VKYLVDNSKN MKMVPLEFVL PISEGERPSM AIDGSIPIID MSGLNGPDEQ RLSTIHAISS ACAHWGFFRV
101: TNHGIKSSIM DEMLKVIEEF FNLPLEEKMR YYSENVMDPV RYGTSLNTTR KHNLHWRDFL RHYGGLVPQS YHLWTDNPPT YKHIAKEYLK EVWQFATKIF
201: GAISEGLGLD PNYIESSLGD EGTQIIAANY YPACPEPNKT LGLAPHSDHG GLTILMDNGI HGLQIKHNHI WYSVPSIPGT FIVNLGDYLE VLSNGKYKSV
301: EHRAVVNAEA ARISIAVGHG PEMNAIVQPA SPLIKEKSKS KYRPIVYKDY IRGQQSTIKR GKSALHEIMN NM
101: TNHGIKSSIM DEMLKVIEEF FNLPLEEKMR YYSENVMDPV RYGTSLNTTR KHNLHWRDFL RHYGGLVPQS YHLWTDNPPT YKHIAKEYLK EVWQFATKIF
201: GAISEGLGLD PNYIESSLGD EGTQIIAANY YPACPEPNKT LGLAPHSDHG GLTILMDNGI HGLQIKHNHI WYSVPSIPGT FIVNLGDYLE VLSNGKYKSV
301: EHRAVVNAEA ARISIAVGHG PEMNAIVQPA SPLIKEKSKS KYRPIVYKDY IRGQQSTIKR GKSALHEIMN NM
001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.