Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g076660.1.1 | Tomato | cytosol | 82.96 | 50.68 |
Solyc10g085190.1.1 | Tomato | cytosol | 68.16 | 42.11 |
TraesCS4B01G328300.1 | Wheat | cytosol | 45.29 | 37.69 |
VIT_08s0105g00380.t01 | Wine grape | cytosol | 60.09 | 37.43 |
Solyc03g096050.2.1 | Tomato | cytosol | 58.3 | 36.41 |
KRH65721 | Soybean | cytosol | 59.64 | 35.66 |
KRH49391 | Soybean | cytosol | 58.3 | 34.03 |
GSMUA_Achr6P15610_001 | Banana | cytosol | 53.36 | 33.81 |
KRH00254 | Soybean | plastid | 51.57 | 33.05 |
GSMUA_Achr7P15540_001 | Banana | cytosol | 51.57 | 32.49 |
AT2G38240.1 | Thale cress | plastid | 50.67 | 32.01 |
CDY07746 | Canola | plastid | 50.22 | 31.73 |
CDY68873 | Canola | plastid | 49.78 | 31.44 |
Bra000045.1-P | Field mustard | plastid | 49.78 | 31.44 |
CDX93319 | Canola | plastid | 49.78 | 31.44 |
CDY14476 | Canola | plastid | 49.78 | 31.44 |
CDY18399 | Canola | plastid | 49.78 | 31.36 |
Bra017132.1-P | Field mustard | plastid | 49.78 | 31.36 |
TraesCS4A01G109200.1 | Wheat | cytosol | 51.12 | 30.98 |
TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 49.33 | 30.73 |
TraesCS4B01G195000.1 | Wheat | cytosol | 50.67 | 30.71 |
TraesCS4D01G195700.1 | Wheat | cytosol | 50.67 | 30.71 |
TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.88 | 30.45 |
HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 50.22 | 30.19 |
TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 48.43 | 30.17 |
EES18946 | Sorghum | cytosol | 49.33 | 30.05 |
Zm00001d028744_P001 | Maize | cytosol | 49.78 | 29.52 |
HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 47.98 | 29.48 |
Os01t0832600-01 | Rice | cytosol | 47.98 | 29.23 |
Os05t0127500-01 | Rice | cytosol | 47.98 | 29.08 |
TraesCS3D01G345600.1 | Wheat | cytosol | 48.88 | 28.84 |
EER92419 | Sorghum | cytosol | 49.33 | 28.72 |
TraesCS3B01G383900.1 | Wheat | cytosol | 47.98 | 28.69 |
Zm00001d042980_P002 | Maize | cytosol | 47.98 | 28.61 |
EES01705 | Sorghum | cytosol | 49.78 | 28.61 |
TraesCS3A01G351400.2 | Wheat | cytosol | 48.43 | 28.5 |
Zm00001d035462_P001 | Maize | cytosol | 48.43 | 28.27 |
Os03t0289800-01 | Rice | cytosol | 48.43 | 27.91 |
Zm00001d047744_P001 | Maize | mitochondrion | 49.33 | 27.03 |
Solyc10g018170.1.1 | Tomato | cytosol | 25.11 | 26.29 |
HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 47.98 | 26.16 |
Zm00001d012456_P004 | Maize | plastid | 49.78 | 23.52 |
PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 18.39 | 22.4 |
Solyc10g005120.1.1 | Tomato | cytosol | 30.49 | 20.36 |
Solyc08g006770.2.1 | Tomato | plastid | 30.94 | 19.66 |
Solyc01g105660.2.1 | Tomato | cytosol, plastid | 30.04 | 18.77 |
KRH38051 | Soybean | cytosol, peroxisome | 16.14 | 18.56 |
Solyc06g073080.2.1 | Tomato | plastid | 25.56 | 17.81 |
Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 26.91 | 17.8 |
Solyc09g008560.2.1 | Tomato | cytosol | 30.04 | 17.72 |
Solyc11g013110.1.1 | Tomato | cytosol, plastid | 27.8 | 17.61 |
Solyc10g018190.1.1 | Tomato | cytosol | 25.56 | 17.43 |
Solyc11g072200.1.1 | Tomato | cytosol, peroxisome, plastid | 27.35 | 17.33 |
Solyc07g043420.2.1 | Tomato | cytosol | 26.46 | 17.25 |
Solyc08g080040.2.1 | Tomato | cytosol | 32.29 | 17.22 |
Solyc02g083860.2.1 | Tomato | cytosol | 27.8 | 17.13 |
Solyc06g073580.2.1 | Tomato | cytosol | 26.91 | 17.0 |
Solyc11g010400.1.1 | Tomato | cytosol | 25.56 | 16.96 |
Solyc07g054930.2.1 | Tomato | cytosol, plastid | 27.8 | 16.67 |
Solyc06g083910.2.1 | Tomato | cytosol | 25.11 | 16.62 |
Solyc07g054920.1.1 | Tomato | cytoskeleton, cytosol, peroxisome, plastid | 26.91 | 16.57 |
Solyc01g105650.2.1 | Tomato | cytosol | 26.46 | 16.57 |
Solyc11g007890.1.1 | Tomato | cytosol | 27.35 | 16.31 |
Solyc02g070080.2.1 | Tomato | cytosol | 25.11 | 16.23 |
Solyc11g010410.1.1 | Tomato | cytosol | 24.22 | 16.07 |
Solyc07g054870.2.1 | Tomato | mitochondrion | 29.15 | 16.05 |
Solyc09g066320.1.1 | Tomato | cytosol, nucleus, peroxisome | 21.52 | 15.58 |
Solyc09g066310.2.1 | Tomato | cytosol | 22.42 | 15.2 |
Solyc07g054940.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 26.91 | 14.63 |
Solyc01g090140.1.1 | Tomato | plastid | 9.87 | 9.82 |
Protein Annotations
EnsemblPlants:Solyc10g076670.1.1 | EnsemblPlantsGene:Solyc10g076670.1 | Gene3D:2.60.120.330 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR027443 |
PANTHER:PTHR10209 | PANTHER:PTHR10209:SF134 | PFAM:PF14226 | SEG:seg | SUPFAM:SSF51197 | UniParc:UPI0002769F06 |
UniProt:K4D209 | MapMan:50.1.13 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:59627074..59628877
Molecular Weight (calculated)
25634.7 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.452
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLQSWPEP IIRVHELSES GIKKIPENFV KLPSERPSSI TTLSSSSHVE NIPLIDLENL NSSDESIRDE TMELISKACR EWGFFQVVNH GVSHELMANA
101: RSVWREFFHL PMDEKQKFAN SPITYEGYGS RLGVVKGAKL DWCDYFFLHY LPEKLKDENK WPSLPISCRH IIGEYGEKVM KLCERLTKIL SINLGLNEDY
201: LHTKFGGDNE RGACLRVNFY PKX
101: RSVWREFFHL PMDEKQKFAN SPITYEGYGS RLGVVKGAKL DWCDYFFLHY LPEKLKDENK WPSLPISCRH IIGEYGEKVM KLCERLTKIL SINLGLNEDY
201: LHTKFGGDNE RGACLRVNFY PKX
001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
Arabidopsis Description
JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.