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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g076660.1.1 Tomato cytosol 82.96 50.68
Solyc10g085190.1.1 Tomato cytosol 68.16 42.11
TraesCS4B01G328300.1 Wheat cytosol 45.29 37.69
VIT_08s0105g00380.t01 Wine grape cytosol 60.09 37.43
Solyc03g096050.2.1 Tomato cytosol 58.3 36.41
KRH65721 Soybean cytosol 59.64 35.66
KRH49391 Soybean cytosol 58.3 34.03
GSMUA_Achr6P15610_001 Banana cytosol 53.36 33.81
KRH00254 Soybean plastid 51.57 33.05
GSMUA_Achr7P15540_001 Banana cytosol 51.57 32.49
AT2G38240.1 Thale cress plastid 50.67 32.01
CDY07746 Canola plastid 50.22 31.73
CDY68873 Canola plastid 49.78 31.44
Bra000045.1-P Field mustard plastid 49.78 31.44
CDX93319 Canola plastid 49.78 31.44
CDY14476 Canola plastid 49.78 31.44
CDY18399 Canola plastid 49.78 31.36
Bra017132.1-P Field mustard plastid 49.78 31.36
TraesCS4A01G109200.1 Wheat cytosol 51.12 30.98
TraesCS1B01G088600.1 Wheat cytoskeleton, cytosol, peroxisome 49.33 30.73
TraesCS4B01G195000.1 Wheat cytosol 50.67 30.71
TraesCS4D01G195700.1 Wheat cytosol 50.67 30.71
TraesCS1D01G072700.1 Wheat cytoskeleton, cytosol, peroxisome 48.88 30.45
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 50.22 30.19
TraesCS1A01G070200.1 Wheat cytoskeleton, cytosol, peroxisome 48.43 30.17
EES18946 Sorghum cytosol 49.33 30.05
Zm00001d028744_P001 Maize cytosol 49.78 29.52
HORVU1Hr1G015050.7 Barley cytosol, peroxisome 47.98 29.48
Os01t0832600-01 Rice cytosol 47.98 29.23
Os05t0127500-01 Rice cytosol 47.98 29.08
TraesCS3D01G345600.1 Wheat cytosol 48.88 28.84
EER92419 Sorghum cytosol 49.33 28.72
TraesCS3B01G383900.1 Wheat cytosol 47.98 28.69
Zm00001d042980_P002 Maize cytosol 47.98 28.61
EES01705 Sorghum cytosol 49.78 28.61
TraesCS3A01G351400.2 Wheat cytosol 48.43 28.5
Zm00001d035462_P001 Maize cytosol 48.43 28.27
Os03t0289800-01 Rice cytosol 48.43 27.91
Zm00001d047744_P001 Maize mitochondrion 49.33 27.03
Solyc10g018170.1.1 Tomato cytosol 25.11 26.29
HORVU3Hr1G087570.4 Barley cytosol, peroxisome, plastid 47.98 26.16
Zm00001d012456_P004 Maize plastid 49.78 23.52
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 18.39 22.4
Solyc10g005120.1.1 Tomato cytosol 30.49 20.36
Solyc08g006770.2.1 Tomato plastid 30.94 19.66
Solyc01g105660.2.1 Tomato cytosol, plastid 30.04 18.77
KRH38051 Soybean cytosol, peroxisome 16.14 18.56
Solyc06g073080.2.1 Tomato plastid 25.56 17.81
Solyc03g080190.2.1 Tomato cytosol, peroxisome, plastid 26.91 17.8
Solyc09g008560.2.1 Tomato cytosol 30.04 17.72
Solyc11g013110.1.1 Tomato cytosol, plastid 27.8 17.61
Solyc10g018190.1.1 Tomato cytosol 25.56 17.43
Solyc11g072200.1.1 Tomato cytosol, peroxisome, plastid 27.35 17.33
Solyc07g043420.2.1 Tomato cytosol 26.46 17.25
Solyc08g080040.2.1 Tomato cytosol 32.29 17.22
Solyc02g083860.2.1 Tomato cytosol 27.8 17.13
Solyc06g073580.2.1 Tomato cytosol 26.91 17.0
Solyc11g010400.1.1 Tomato cytosol 25.56 16.96
Solyc07g054930.2.1 Tomato cytosol, plastid 27.8 16.67
Solyc06g083910.2.1 Tomato cytosol 25.11 16.62
Solyc07g054920.1.1 Tomato cytoskeleton, cytosol, peroxisome, plastid 26.91 16.57
Solyc01g105650.2.1 Tomato cytosol 26.46 16.57
Solyc11g007890.1.1 Tomato cytosol 27.35 16.31
Solyc02g070080.2.1 Tomato cytosol 25.11 16.23
Solyc11g010410.1.1 Tomato cytosol 24.22 16.07
Solyc07g054870.2.1 Tomato mitochondrion 29.15 16.05
Solyc09g066320.1.1 Tomato cytosol, nucleus, peroxisome 21.52 15.58
Solyc09g066310.2.1 Tomato cytosol 22.42 15.2
Solyc07g054940.1.1 Tomato cytosol, mitochondrion, peroxisome, plastid 26.91 14.63
Solyc01g090140.1.1 Tomato plastid 9.87 9.82
Protein Annotations
EnsemblPlants:Solyc10g076670.1.1EnsemblPlantsGene:Solyc10g076670.1Gene3D:2.60.120.330InterPro:DIOX_NInterPro:IPNS-likeInterPro:IPR027443
PANTHER:PTHR10209PANTHER:PTHR10209:SF134PFAM:PF14226SEG:segSUPFAM:SSF51197UniParc:UPI0002769F06
UniProt:K4D209MapMan:50.1.13::::
Description
No Description!
Coordinates
chr10:+:59627074..59628877
Molecular Weight (calculated)
25634.7 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.452
Length
223 amino acids
Sequence
(BLAST)
001: MSRLQSWPEP IIRVHELSES GIKKIPENFV KLPSERPSSI TTLSSSSHVE NIPLIDLENL NSSDESIRDE TMELISKACR EWGFFQVVNH GVSHELMANA
101: RSVWREFFHL PMDEKQKFAN SPITYEGYGS RLGVVKGAKL DWCDYFFLHY LPEKLKDENK WPSLPISCRH IIGEYGEKVM KLCERLTKIL SINLGLNEDY
201: LHTKFGGDNE RGACLRVNFY PKX
Best Arabidopsis Sequence Match ( AT3G55970.1 )
(BLAST)
001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
Arabidopsis Description
JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.