Factsheet for Solyc09g008560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009900	Potato	cytosol	95.77	94.76
KRG96078	Soybean	cytosol	62.96	63.47
Solyc11g007890.1.1	Tomato	cytosol	62.43	63.1
KRH32602	Soybean	cytosol	63.49	62.83
VIT_08s0007g04540.t01	Wine grape	cytosol	62.43	62.6
KRH67790	Soybean	cytosol	60.58	62.57
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	60.05	62.02
KRH07794	Soybean	cytosol	51.59	61.9
KRH19976	Soybean	cytosol	62.17	61.68
CDX75020	Canola	cytosol	57.94	59.51
Bra017227.1-P	Field mustard	cytosol	57.67	59.4
GSMUA_Achr9P23620_001	Banana	cytosol	55.29	55.29
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	54.76	54.33
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	44.18	51.38
TraesCS4A01G311000.1	Wheat	cytosol	47.88	48.92
TraesCS7D01G279500.1	Wheat	cytosol	48.15	47.64
TraesCS4D01G002800.1	Wheat	cytosol, plastid	48.68	47.06
TraesCS4B01G003300.1	Wheat	plastid	48.15	47.03
Zm00001d049926_P001	Maize	cytosol	50.0	46.9
EER96378	Sorghum	cytosol	48.68	46.7
Os09t0570800-01	Rice	cytosol	46.03	46.52
EES15170	Sorghum	cytosol	50.53	46.36
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	47.62	45.0
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	48.15	44.83
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	48.15	44.61
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.35	44.31
EES08336	Sorghum	cytosol	46.03	43.94
HORVU4Hr1G000050.3	Barley	plastid	46.83	43.81
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.53	43.41
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	36.77	41.25
Zm00001d052999_P001	Maize	cytosol	46.03	39.28
Solyc06g073080.2.1	Tomato	plastid	33.07	39.06
Solyc01g090140.1.1	Tomato	plastid	23.02	38.84
Solyc01g105660.2.1	Tomato	cytosol, plastid	35.19	37.25
Solyc01g105650.2.1	Tomato	cytosol	33.86	35.96
Solyc10g076660.1.1	Tomato	cytosol	34.66	35.89
Solyc06g083910.2.1	Tomato	cytosol	31.75	35.61
Solyc08g006770.2.1	Tomato	plastid	32.8	35.33
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	33.6	35.08
Solyc03g096050.2.1	Tomato	cytosol	33.07	35.01
Solyc07g054930.2.1	Tomato	cytosol, plastid	34.39	34.95
Solyc02g070080.2.1	Tomato	cytosol	31.48	34.49
Solyc10g085190.1.1	Tomato	cytosol	31.48	32.96
Solyc07g043420.2.1	Tomato	cytosol	29.63	32.75
Solyc07g054870.2.1	Tomato	mitochondrion	34.92	32.59
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	26.45	32.47
Solyc10g005120.1.1	Tomato	cytosol	28.57	32.34
Solyc10g018190.1.1	Tomato	cytosol	27.51	31.8
Solyc11g013110.1.1	Tomato	cytosol, plastid	29.37	31.53
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	34.13	31.46
Solyc09g066310.2.1	Tomato	cytosol	27.25	31.31
Solyc11g010410.1.1	Tomato	cytosol	26.98	30.36
Solyc10g018170.1.1	Tomato	cytosol	16.93	30.05
Solyc10g076670.1.1	Tomato	cytosol	17.72	30.04
Solyc11g010400.1.1	Tomato	cytosol	26.45	29.76
Solyc02g083860.2.1	Tomato	cytosol	28.31	29.56
Solyc06g073580.2.1	Tomato	cytosol	27.51	29.46
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	26.19	28.12
Solyc08g080040.2.1	Tomato	cytosol	28.04	25.36

Protein Annotations

MapMan:11.6.3.3	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4CQP4	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF152	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc09g008560.2
EnsemblPlants:Solyc09g008560.2.1	UniParc:UPI000276BF04	:	:	:	:

Description

No Description!

Coordinates

chr9:+:2048866..2052899

Molecular Weight (calculated)

43066.6 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.340

Length

378 amino acids

Sequence
(BLAST)

001: MSPSLAKSSE KLKNEIEDYH KGVKYLHESG IQKVPKKYIF PISERPNCYT INENPQVASK HNLKLPVIDF SQLYGPNRAQ VLDSLSYACE NYGFFQLTNH
101: GIPEEVIKNM VDVGGRFFDL PLVEREKYMT KDMTTPVRYG TSFNQTKDGV FCWRDFLKLV CDPLPQVLPH WPSSPSYFRE MAVTYSKETK ILFIKLVEAI
201: LESLGINVAT KNKTQQNDEE IMLKEFEDGS QLMAVNFYPP CPNPDLTLGM PPHSDYGFLT LLLQDEVEGL QVKSNDDWVT IQPIPNAFVV NVGDHLEIFS
301: NGKYKSVLHR VLVNSLKSRI SVASLHSLPF NSIIKPSPKL ISETNPSLYK DTNFAAFLEY LKSCDSTNKS FLETRRLT

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.