Factsheet for Solyc11g013110.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g083860.2.1
Solyc02g085020.2.1
Solyc05g053550.2.1
Solyc09g091510.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08640.1	Solyc02g083860.2.1	AT3G51240.1	18467451
AT5G08640.1	Solyc05g053550.2.1	AT5G13930.1	18467451
AT5G08640.1	Solyc09g091510.2.1	AT5G13930.1	18467451
AT5G08640.1	Solyc02g085020.2.1	AT5G42800.1	18467451
AT5G63590.1	Solyc05g053550.2.1	AT5G13930.1	18467451
AT5G63590.1	Solyc09g091510.2.1	AT5G13930.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036565	Potato	cytosol	94.89	94.89
VIT_18s0001g03470.t01	Wine grape	cytosol	63.07	68.94
KRH18787	Soybean	cytosol	63.92	67.37
VIT_18s0001g03490.t01	Wine grape	cytosol	63.64	66.87
KRH53203	Soybean	cytosol	62.78	66.37
KRH16579	Soybean	cytosol, mitochondrion	55.4	64.57
AT5G08640.1	Thale cress	cytosol	60.23	63.1
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	60.23	63.1
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	59.94	62.8
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	59.94	62.8
GSMUA_Achr3P07030_001	Banana	cytosol	59.38	62.76
GSMUA_Achr10P...	Banana	cytosol	59.09	62.09
GSMUA_Achr10P...	Banana	cytosol	53.69	60.38
GSMUA_Achr8P23330_001	Banana	cytosol	57.1	60.36
Os02t0767300-01	Rice	cytosol	51.99	55.29
TraesCS6D01G310700.1	Wheat	plastid	51.99	54.79
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	47.73	54.55
HORVU6Hr1G056710.2	Barley	cytosol, peroxisome	11.08	54.17
TraesCS6B01G362100.1	Wheat	cytosol	51.14	53.89
TraesCS6A01G331400.1	Wheat	plastid	50.57	53.29
EES07584	Sorghum	cytosol	50.0	53.01
Bra038648.1-P	Field mustard	cytosol	44.6	52.86
CDY41522	Canola	cytosol	44.6	52.86
CDY39565	Canola	cytosol	45.45	52.46
Zm00001d018184_P001	Maize	endoplasmic reticulum	46.88	52.38
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	46.88	52.38
Bra018076.1-P	Field mustard	cytosol	45.17	52.13
CDY48154	Canola	cytosol	45.17	52.13
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	35.8	50.4
TraesCS4D01G339800.1	Wheat	cytosol, plastid	47.44	49.7
TraesCS4B01G344800.1	Wheat	cytosol	45.74	49.69
TraesCS4B01G344900.1	Wheat	cytosol, plastid	43.47	49.51
CDY69013	Canola	cytosol	42.9	49.19
TraesCS5A01G513700.1	Wheat	cytosol, plastid	46.88	49.11
Bra038647.1-P	Field mustard	cytosol	42.33	48.53
Bra037747.1-P	Field mustard	cytosol	43.18	48.41
AT5G43935.1	Thale cress	cytosol	39.77	47.78
CDY39860	Canola	cytosol	41.48	47.25
CDX81188	Canola	cytosol	42.9	47.19
AT5G63600.2	Thale cress	cytosol	43.47	46.93
CDX97750	Canola	cytosol	29.26	46.61
CDY31361	Canola	cytosol	40.62	46.13
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	36.36	45.88
Bra029211.1-P	Field mustard	cytosol	40.34	45.81
CDY41520	Canola	cytosol	32.1	45.75
EES00073	Sorghum	cytosol	39.77	45.45
CDY41521	Canola	cytosol, mitochondrion	2.56	42.86
HORVU6Hr1G080360.1	Barley	plastid	40.62	40.86
Solyc06g083910.2.1	Tomato	cytosol	34.38	35.91
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	33.52	35.01
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	30.11	34.42
Solyc03g096050.2.1	Tomato	cytosol	34.66	34.17
CDY31363	Canola	cytosol	40.91	34.12
VIT_18s0001g03510.t01	Wine grape	cytosol	65.62	33.97
Bra029212.1-P	Field mustard	cytosol	40.62	33.89
Solyc10g005120.1.1	Tomato	cytosol	31.82	33.53
Solyc06g073080.2.1	Tomato	plastid	30.4	33.44
Solyc07g043420.2.1	Tomato	cytosol	32.39	33.33
Solyc02g070080.2.1	Tomato	cytosol	32.1	32.75
Solyc08g080040.2.1	Tomato	cytosol	38.64	32.54
Solyc09g066310.2.1	Tomato	cytosol	30.4	32.52
Solyc10g076660.1.1	Tomato	cytosol	33.24	32.05
Solyc10g085190.1.1	Tomato	cytosol	32.39	31.58
Solyc10g018190.1.1	Tomato	cytosol	28.41	30.58
Solyc08g006770.2.1	Tomato	plastid	30.11	30.2
Solyc10g018170.1.1	Tomato	cytosol	18.18	30.05
Solyc01g105660.2.1	Tomato	cytosol, plastid	30.4	29.97
Solyc01g105650.2.1	Tomato	cytosol	30.11	29.78
Solyc09g008560.2.1	Tomato	cytosol	31.53	29.37
Solyc01g090140.1.1	Tomato	plastid	18.47	29.02
Solyc11g010410.1.1	Tomato	cytosol	27.56	28.87
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	29.55	28.73
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	28.69	28.69
Solyc11g007890.1.1	Tomato	cytosol	30.4	28.61
Solyc06g073580.2.1	Tomato	cytosol	28.41	28.33
Solyc07g054930.2.1	Tomato	cytosol, plastid	29.83	28.23
Solyc11g010400.1.1	Tomato	cytosol	26.7	27.98
Solyc02g083860.2.1	Tomato	cytosol	28.69	27.9
Solyc10g076670.1.1	Tomato	cytosol	17.61	27.8
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	30.97	26.59
Solyc07g054870.2.1	Tomato	mitochondrion	30.4	26.42

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491	GO:GO:0045431
GO:GO:0046872	GO:GO:0051555	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:K4D6B5	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF165	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc11g013110.1	EnsemblPlants:Solyc11g013110.1.1	UniParc:UPI000276A2A4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:5961440..5965680

Molecular Weight (calculated)

39992.0 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.458

Length

352 amino acids

Sequence
(BLAST)

001: MKTIQGQSSP TSLTMEVARV QAISSITKCM DTIPSEYIRS ENEQPAATTL QGVVLEVPVI DLSKVDDDEE KLVKEMVEAS KEWGIFQVIN HGIPDEVIEN
101: LQRVGKEFFE EVAQEEKELI AKKEGAKSLE GYGTSLQKEI EGKKGWVDHL FHKIWPPPAI NYHYWPKNPP SYREANEEYA KCLRKVANSI FRSLSLGLGL
201: EGHEMMEAAG GEDIVYMLKI NYYPPCPRPD LALGVVAHTD MSHITLLVPN EVQGLQVFKD GHWYDVNYIP NAIIVHIGDQ VEILSNGKYK SVYHRTTVNK
301: HKTRMSWPVF LEPSSEHEVG PIPKLINEAN PPKFKTKKYK DYVYCKLNKL PQ

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.