Factsheet for GSMUA_Achr10P25240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P02770_001
GSMUA_Achr4P24540_001
GSMUA_Achr6P10910_001
GSMUA_Achr6P16370_001
GSMUA_Achr7P16780_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08640.1	GSMUA_Achr2P02770_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr7P16780_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr4P24540_001	AT5G42800.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	81.19	86.9
GSMUA_Achr3P07030_001	Banana	cytosol	76.42	76.88
GSMUA_Achr8P23330_001	Banana	cytosol	66.87	67.27
VIT_18s0001g03470.t01	Wine grape	cytosol	61.79	64.29
VIT_18s0001g03490.t01	Wine grape	cytosol	62.39	62.39
AT5G08640.1	Thale cress	cytosol	61.79	61.61
Os02t0767300-01	Rice	cytosol	60.3	61.03
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	61.19	61.01
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	61.19	61.01
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	61.19	61.01
Solyc11g013110.1.1	Tomato	cytosol, plastid	62.09	59.09
EES07584	Sorghum	cytosol	58.51	59.04
KRH53203	Soybean	cytosol	58.51	58.86
PGSC0003DMT400036565	Potato	cytosol	61.79	58.81
TraesCS6D01G310700.1	Wheat	plastid	58.51	58.68
KRH18787	Soybean	cytosol	57.91	58.08
TraesCS6B01G362100.1	Wheat	cytosol	57.31	57.48
TraesCS6A01G331400.1	Wheat	plastid	57.01	57.19
Zm00001d018184_P001	Maize	endoplasmic reticulum	53.73	57.14
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	53.73	57.14
KRH16579	Soybean	cytosol, mitochondrion	50.75	56.29
TraesCS4B01G344800.1	Wheat	cytosol	53.13	54.94
TraesCS5A01G513700.1	Wheat	cytosol, plastid	54.93	54.76
TraesCS4B01G344900.1	Wheat	cytosol, plastid	49.85	54.05
TraesCS4D01G339800.1	Wheat	cytosol, plastid	54.03	53.87
EES00073	Sorghum	cytosol	48.06	52.27
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	47.76	51.95
Bra018076.1-P	Field mustard	cytosol	46.27	50.82
CDY39565	Canola	cytosol	45.97	50.49
CDY48154	Canola	cytosol	45.67	50.16
Bra038648.1-P	Field mustard	cytosol	43.88	49.49
CDY41522	Canola	cytosol	43.58	49.16
HORVU6Hr1G056710.2	Barley	cytosol, peroxisome	10.15	47.22
AT5G63600.2	Thale cress	cytosol	44.78	46.01
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	34.33	46.0
Bra037747.1-P	Field mustard	cytosol	42.99	45.86
AT5G43935.1	Thale cress	cytosol	40.0	45.73
CDX97750	Canola	cytosol	30.15	45.7
Bra038647.1-P	Field mustard	cytosol	41.79	45.6
CDY69013	Canola	cytosol	41.79	45.6
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	37.31	44.8
CDX81188	Canola	cytosol	42.39	44.38
CDY39860	Canola	cytosol	40.6	44.01
CDY31361	Canola	cytosol	40.6	43.87
Bra029211.1-P	Field mustard	cytosol	40.3	43.55
CDY41521	Canola	cytosol, mitochondrion	2.69	42.86
HORVU6Hr1G080360.1	Barley	plastid	44.18	42.29
CDY41520	Canola	cytosol	31.04	42.11
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	44.48	41.39
GSMUA_Achr10P...	Banana	cytosol	37.91	36.08
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	35.52	35.31
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	35.22	35.01
GSMUA_Achr9P04430_001	Banana	cytosol	34.63	34.83
GSMUA_Achr6P32920_001	Banana	cytosol	34.03	34.76
GSMUA_Achr11P...	Banana	cytosol	34.33	34.74
GSMUA_Achr5P29330_001	Banana	cytosol	36.42	34.37
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	34.63	34.22
GSMUA_Achr6P15610_001	Banana	cytosol	35.82	34.09
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	34.63	34.02
GSMUA_Achr7P15540_001	Banana	cytosol	35.82	33.9
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	33.73	33.53
GSMUA_Achr2P19210_001	Banana	cytosol	34.93	33.52
GSMUA_Achr5P08490_001	Banana	cytosol	35.52	33.33
GSMUA_Achr5P12830_001	Banana	cytosol	33.43	33.04
GSMUA_Achr1P00770_001	Banana	cytosol	33.13	32.94
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.33	32.58
CDY31363	Canola	cytosol	40.9	32.46
Bra029212.1-P	Field mustard	cytosol	40.6	32.23
VIT_18s0001g03510.t01	Wine grape	cytosol	62.39	30.74
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	35.52	30.51
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	33.13	29.13
GSMUA_Achr2P02770_001	Banana	cytosol	31.94	28.76
GSMUA_Achr7P16780_001	Banana	cytosol	31.64	28.42
GSMUA_Achr9P15020_001	Banana	cytosol	29.25	27.92
GSMUA_Achr9P23620_001	Banana	cytosol	31.04	27.51
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	26.27	27.08

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G25240_001
EnsemblPlants:GSMUA_Achr10P25240_001	EnsemblPlants:GSMUA_Achr10T25240_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RL98
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF165
SUPFAM:SSF51197	UniParc:UPI000295C125	SEG:seg	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:GMGC_GENE;Acc:GSMUA_Achr10G25240_001]

Coordinates

chr10:-:29326369..29328343

Molecular Weight (calculated)

37791.7 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.298

Length

335 amino acids

Sequence
(BLAST)

001: MEVERVQVIA SVCAADGVMP PEFIRSEHEQ PGITTYRGPA PEIPVIDLAG ADRDRLTIAV AEASREWGIF QLLNHGIPRE VIRELQRVGK EFFELPQEEK
101: EMYAMEFKPG SSEGYGTKLQ RELEGKKAWV DFFFHYVSPP ARVNHAIWPK NPSDYRKANE EYAKHLVGLV DKMLTTLSRG LGLEEHVLKG ALGGDGLELR
201: LKMNYYPPCP RPDLALGVVA HTDMCAITFL VPNLVPGLQV FKDEHWIDVN FIPNAVIVHI GDQIEILSNG TYKSVLHRTT VNKEKVRMSW PVFCAPPGEM
301: VIGPLQQLVG DESPAKYKPK KYKDYAYCKL NKLPQ

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.