Factsheet for GSMUA_Achr6P32920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04430_001	Banana	cytosol	77.13	75.98
GSMUA_Achr10P...	Banana	cytosol	70.43	65.62
GSMUA_Achr11P...	Banana	cytosol	53.66	53.17
GSMUA_Achr5P29330_001	Banana	cytosol	57.32	52.96
GSMUA_Achr6P15610_001	Banana	cytosol	55.18	51.42
GSMUA_Achr7P15540_001	Banana	cytosol	51.83	48.02
GSMUA_Achr5P08490_001	Banana	cytosol	52.13	47.9
GSMUA_Achr10P...	Banana	cytosol	35.06	36.74
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	35.67	34.72
GSMUA_Achr10P...	Banana	cytosol	34.76	34.03
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	34.76	33.83
GSMUA_Achr1P00770_001	Banana	cytosol	34.76	33.83
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	34.45	33.53
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	34.76	33.43
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	34.45	33.33
GSMUA_Achr5P12830_001	Banana	cytosol	34.45	33.33
GSMUA_Achr2P19210_001	Banana	cytosol	35.06	32.95
GSMUA_Achr8P23330_001	Banana	cytosol	32.93	32.43
GSMUA_Achr3P07030_001	Banana	cytosol	32.32	31.83
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.15	31.73
GSMUA_Achr2P02770_001	Banana	cytosol	33.84	29.84
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	34.45	29.66
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	32.01	29.17
GSMUA_Achr7P16780_001	Banana	cytosol	32.62	28.69
GSMUA_Achr9P23620_001	Banana	cytosol	32.93	28.57
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	33.84	28.46
GSMUA_Achr9P15020_001	Banana	cytosol	29.88	27.92
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	25.91	26.15

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G32920_001
EnsemblPlants:GSMUA_Achr6P32920_001	EnsemblPlants:GSMUA_Achr6T32920_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0TC86
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF134
SUPFAM:SSF51197	UniParc:UPI000294FF1F	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G32920_001]

Coordinates

chr6:-:32114573..32119434

Molecular Weight (calculated)

36192.5 Da

IEP (calculated)

5.262

GRAVY (calculated)

-0.200

Length

328 amino acids

Sequence
(BLAST)

001: MEVAEEWPEP IVRVQTLADA EAVPERYIKP PSERPNLNPG TALAPSETGS LPVIDLAGLS GGAAERRATM LAVSDACRDW GFFQVVNHGV SPELMEGMRE
101: VWTAFFRLPM AEKQAYANSP KTFEGNYDKW PVLPASLSRA MTEAYGEELE KLCGVIKKVL SATLGLDEEF LHRAFGEAGA CLRVNYYPKC PQPDLTLGLS
201: PHSDPGGMTV LLTDHHVKGL QVRKGDDWIT VEPVPGALIV NIGDQIQVLT NATYKSVEHR VVVNAATERL SMAFFFNPND DLPIQPAAEL VTPEAPPLYK
301: RLTFKEYKLF MRMLGPRGKS HVDFVKST

Best Arabidopsis Sequence Match ( AT2G38240.1 )
(BLAST)

001: MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR

Arabidopsis Description

ANSProbable 2-oxoglutarate-dependent dioxygenase ANS [Source:UniProtKB/Swiss-Prot;Acc:O80449]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.