Factsheet for GSMUA_Achr4P04450_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
peroxisome 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23620_001	Banana	cytosol	68.92	59.26
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	61.85	52.76
VIT_00s0250g00090.t01	Wine grape	cytosol	56.62	49.2
PGSC0003DMT400070302	Potato	cytosol	54.46	47.97
Solyc11g007890.1.1	Tomato	cytosol	54.77	47.59
KRH67790	Soybean	cytosol	53.54	47.54
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	53.54	47.54
VIT_08s0007g04540.t01	Wine grape	cytosol	54.15	46.68
CDX75020	Canola	cytosol	52.62	46.47
KRG96078	Soybean	cytosol	52.92	45.87
Bra017227.1-P	Field mustard	cytosol	51.38	45.5
PGSC0003DMT400009900	Potato	cytosol	52.0	44.24
Solyc09g008560.2.1	Tomato	cytosol	51.38	44.18
KRH32602	Soybean	cytosol	51.38	43.72
KRH19976	Soybean	cytosol	50.46	43.04
KRH07794	Soybean	cytosol	41.54	42.86
TraesCS7D01G279500.1	Wheat	cytosol	49.85	42.41
TraesCS4A01G311000.1	Wheat	cytosol	48.0	42.16
Zm00001d049926_P001	Maize	cytosol	50.77	40.94
EES15170	Sorghum	cytosol	51.38	40.53
TraesCS4B01G003300.1	Wheat	plastid	48.0	40.31
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	50.15	40.15
EER96378	Sorghum	cytosol	48.62	40.1
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	49.23	40.0
EES08336	Sorghum	cytosol	48.62	39.9
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	49.54	39.85
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	49.85	39.71
TraesCS4D01G002800.1	Wheat	cytosol, plastid	47.69	39.64
Os09t0570800-01	Rice	cytosol	44.62	38.77
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.69	38.18
HORVU4Hr1G000050.3	Barley	plastid	46.77	37.62
Zm00001d052999_P001	Maize	cytosol	47.38	34.76
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	31.69	30.21
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	31.38	30.09
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	30.46	29.38
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	30.15	29.08
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	31.38	28.9
GSMUA_Achr1P00770_001	Banana	cytosol	29.85	28.78
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	29.54	28.49
GSMUA_Achr5P12830_001	Banana	cytosol	29.54	28.32
GSMUA_Achr10P...	Banana	cytosol	29.85	27.56
GSMUA_Achr3P07030_001	Banana	cytosol	27.69	27.03
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	32.31	26.92
GSMUA_Achr11P...	Banana	cytosol	27.38	26.89
GSMUA_Achr9P15020_001	Banana	cytosol	28.62	26.5
GSMUA_Achr5P08490_001	Banana	cytosol	28.92	26.33
GSMUA_Achr10P...	Banana	cytosol	27.08	26.27
GSMUA_Achr10P...	Banana	cytosol	25.23	26.2
GSMUA_Achr6P15610_001	Banana	cytosol	28.31	26.14
GSMUA_Achr7P15540_001	Banana	cytosol	28.31	25.99
GSMUA_Achr6P32920_001	Banana	cytosol	26.15	25.91
GSMUA_Achr8P23330_001	Banana	cytosol	26.15	25.53
GSMUA_Achr5P29330_001	Banana	cytosol	27.38	25.07
GSMUA_Achr9P04430_001	Banana	cytosol	25.54	24.92
GSMUA_Achr2P19210_001	Banana	cytosol	26.46	24.64
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	26.15	23.61
GSMUA_Achr2P02770_001	Banana	cytosol	24.62	21.51
GSMUA_Achr7P16780_001	Banana	cytosol	23.38	20.38

Protein Annotations

EnsemblPlants:GSMUA_Achr4P04450_001	EnsemblPlants:GSMUA_Achr4T04450_001	EnsemblPlantsGene:GSMUA_Achr4G04450_001	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF152	PFAM:PF03171
PFAM:PF14226	SUPFAM:SSF51197	UniParc:UPI00029486BF	UniProt:M0SL12	MapMan:50.1.13	:

Description

Putative S-norcoclaurine synthase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G04450_001]

Coordinates

chr4:+:3512901..3516955

Molecular Weight (calculated)

37450.2 Da

IEP (calculated)

9.312

GRAVY (calculated)

-0.394

Length

325 amino acids

Sequence
(BLAST)

001: MKRVRHLCDN GITKVPRKYV LPLPDRPQLT PAARKPSLKL PVIDVGQLLS PDRTEVLATL DRACKEYGFF QTVNHSIAGE VTRRMIDVGK RFFELRFEER
101: AKYMKTDVRG PVTYGTSFNQ TKDRVFCWRD FLQLSCHPLD SVLPWWPTSP MDLRDEVVSY AKHIKSLFLV LMTAVPESLG ADPAILKEFD DGSQLMAINC
201: YPAGEWITVE PLPNSVIVNV GDHLEIYSNR RYKIVLHRAL VNTSKSRLSM ASLHSVSFDR VVRLSPELVD KDHPKLYKDT DFAAFLTDTS CCETKHKHFL
301: ESRKDWRRTN PRARVDLPLR DYKDS

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.