Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P29330_001 | Banana | cytosol | 61.62 | 61.97 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 59.94 | 60.8 |
| GSMUA_Achr11P... | Banana | cytosol | 54.9 | 59.21 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 57.42 | 57.91 |
| GSMUA_Achr9P04430_001 | Banana | cytosol | 51.82 | 55.56 |
| GSMUA_Achr10P... | Banana | cytosol | 54.62 | 55.4 |
| GSMUA_Achr6P32920_001 | Banana | cytosol | 47.9 | 52.13 |
| GSMUA_Achr2P19210_001 | Banana | cytosol | 40.62 | 41.55 |
| GSMUA_Achr4P30130_001 | Banana | cytosol, nucleus, peroxisome | 38.1 | 40.36 |
| GSMUA_Achr1P03620_001 | Banana | cytosol, nucleus, peroxisome | 37.82 | 40.06 |
| GSMUA_Achr1P00770_001 | Banana | cytosol | 37.25 | 39.47 |
| GSMUA_Achr5P12830_001 | Banana | cytosol | 37.25 | 39.23 |
| GSMUA_Achr8P12320_001 | Banana | cytosol, nucleus, peroxisome | 36.97 | 38.71 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 37.53 | 37.96 |
| GSMUA_Achr2P10240_001 | Banana | cytosol, nucleus, peroxisome | 35.85 | 37.76 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 34.17 | 36.64 |
| GSMUA_Achr5P10230_001 | Banana | cytosol, nucleus, peroxisome | 34.45 | 36.5 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 33.89 | 36.34 |
| GSMUA_Achr10P... | Banana | cytosol | 31.65 | 36.1 |
| GSMUA_Achr10P... | Banana | cytosol | 33.33 | 35.52 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 37.25 | 34.1 |
| GSMUA_Achr9P23620_001 | Banana | cytosol | 34.73 | 32.8 |
| GSMUA_Achr9P15020_001 | Banana | cytosol | 32.21 | 32.76 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 34.17 | 32.71 |
| GSMUA_Achr5P04080_001 | Banana | cytosol, peroxisome, plastid | 32.77 | 32.5 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 33.05 | 31.72 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 33.33 | 31.23 |
| GSMUA_Achr4P04450_001 | Banana | cytosol, mitochondrion | 26.33 | 28.92 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr5G08490_001 |
| EnsemblPlants:GSMUA_Achr5P08490_001 | EnsemblPlants:GSMUA_Achr5T08490_001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | UniProt:M0SWS8 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF134 |
| SUPFAM:SSF51197 | UniParc:UPI00029650B6 | : | : | : | : |
Description
Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08490_001]
Coordinates
chr5:+:6176163..6177611
Molecular Weight (calculated)
40014.0 Da
IEP (calculated)
6.409
GRAVY (calculated)
-0.283
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLRQWPEP VVPVQSLSDG GLTSIPEKYV KPPSDRPSLE ANLDRGLTMP VVDLRGIYDG SVDSRAAMVA IWDACKEWGF FQVINHGVRP DLVEEMKGVW
101: REFFRRPLDE KQRYANSPAT YEGYGSRVGV EKGAVLDWGD YYFLHLLPLS IKSHDRHWPA RPSTLRKVTE EYGGEVFKLC GVLLRVLSMG LGLDEEYFRR
201: AFGGDGTASC VRVNLYPKCP QPELTLGLSP HSDPGGLTVL LADDHVEGLQ VRKDGAWLTV RPVPGAFIVN VADQIEVISN GIYKSVDHRV IANSKDERLS
301: IAFFYNPEGD VAIGPAPELL TPQLPPLYPC ITFNEYRMYV RKRGLSGKSQ MKSLKLY
101: REFFRRPLDE KQRYANSPAT YEGYGSRVGV EKGAVLDWGD YYFLHLLPLS IKSHDRHWPA RPSTLRKVTE EYGGEVFKLC GVLLRVLSMG LGLDEEYFRR
201: AFGGDGTASC VRVNLYPKCP QPELTLGLSP HSDPGGLTVL LADDHVEGLQ VRKDGAWLTV RPVPGAFIVN VADQIEVISN GIYKSVDHRV IANSKDERLS
301: IAFFYNPEGD VAIGPAPELL TPQLPPLYPC ITFNEYRMYV RKRGLSGKSQ MKSLKLY
001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
Arabidopsis Description
Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.