Factsheet for GSMUA_Achr2P19210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0162500-01	Rice	cytosol	69.91	69.32
EER87904	Sorghum	plastid	68.19	68.99
TraesCS7D01G119600.1	Wheat	plastid	67.91	68.9
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	68.19	68.79
HORVU7Hr1G025650.1	Barley	cytosol	67.34	67.72
TraesCS7B01G020000.1	Wheat	plastid	66.76	67.34
Zm00001d045233_P002	Maize	plastid	69.34	62.21
VIT_03s0017g02350.t01	Wine grape	cytosol	63.04	61.97
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	60.17	61.4
CDY32234	Canola	cytosol, nucleus, peroxisome	60.17	61.4
CDY34450	Canola	cytosol	59.6	60.82
Solyc10g005120.1.1	Tomato	cytosol	58.17	60.78
KRG98061	Soybean	mitochondrion, plastid	60.46	60.11
KRH30715	Soybean	cytosol	60.17	57.22
AT4G16330.2	Thale cress	plastid	58.17	55.77
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	47.85	44.53
GSMUA_Achr5P08490_001	Banana	cytosol	41.55	40.62
GSMUA_Achr11P...	Banana	cytosol	38.4	40.48
GSMUA_Achr6P15610_001	Banana	cytosol	40.11	39.77
GSMUA_Achr5P29330_001	Banana	cytosol	40.4	39.72
GSMUA_Achr7P15540_001	Banana	cytosol	40.11	39.55
GSMUA_Achr10P...	Banana	cytosol	37.82	37.5
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	35.53	36.8
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	35.82	36.66
GSMUA_Achr9P04430_001	Banana	cytosol	34.67	36.34
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	35.24	36.28
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	34.96	36.2
GSMUA_Achr10P...	Banana	cytosol	32.38	36.1
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	34.67	35.91
GSMUA_Achr3P07030_001	Banana	cytosol	33.52	35.14
GSMUA_Achr6P32920_001	Banana	cytosol	32.95	35.06
GSMUA_Achr1P00770_001	Banana	cytosol	33.81	35.01
GSMUA_Achr10P...	Banana	cytosol	33.52	34.93
GSMUA_Achr5P12830_001	Banana	cytosol	33.52	34.51
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.67	34.28
GSMUA_Achr8P23330_001	Banana	cytosol	32.66	34.23
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	37.54	33.59
GSMUA_Achr9P15020_001	Banana	cytosol	31.81	31.62
GSMUA_Achr7P16780_001	Banana	cytosol	33.52	31.37
GSMUA_Achr2P02770_001	Banana	cytosol	32.66	30.65
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	30.09	29.17
GSMUA_Achr9P23620_001	Banana	cytosol	30.95	28.57
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	30.66	28.08
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	24.64	26.46

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G19210_001	EnsemblPlants:GSMUA_Achr2P19210_001
EnsemblPlants:GSMUA_Achr2T19210_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0S9B2	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF226	SUPFAM:SSF51197
UniParc:UPI000296EA38	:	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G19210_001]

Coordinates

chr2:-:19347095..19352285

Molecular Weight (calculated)

38860.3 Da

IEP (calculated)

5.619

GRAVY (calculated)

-0.327

Length

349 amino acids

Sequence
(BLAST)

001: MEAAAETQRV QTLVEAGVAH LPARYVQPPE LRPHLSRRRD ATADCGGIPV VDLGPSGGDP VPAIGRACRE WGAFQVVNHD VRPGLLEEVR AMGSSFFRAP
101: MEAKLRFACD PRSPASEGYG SRMLAKDDGV LDWRDYFDHH ALPESRRNPS QWPDFPSNYR DVVIEYSNNM KKLAQTLLCM ISQSLGLPPL YIEEAVGEVY
201: QNITISYYPP CPQPDLALGL QSHSDMGAIT LLIQDDVEGL EVLKDGEWVQ VQPLSDAVVV ILADQTEVIS NGEYKSAVHR AVVNAHHPRL SVATFYDPCK
301: TRKIYPAMQL ITKQSPLKYR EVLYGDYVSS WYSKGPEGKR NIDALLINQ

Best Arabidopsis Sequence Match ( AT4G16330.2 )
(BLAST)

001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.