Factsheet for GSMUA_Achr5P04080_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27988	Soybean	cytosol	67.5	69.03
KRH77456	Soybean	cytosol	67.5	69.03
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	66.94	67.89
AT4G22880.2	Thale cress	cytosol	65.56	66.29
Bra013652.1-P	Field mustard	cytosol	65.28	65.64
CDY41286	Canola	cytosol	65.28	65.64
CDY10816	Canola	cytosol	65.0	65.36
CDX94133	Canola	cytosol	64.72	65.08
Bra019350.1-P	Field mustard	cytosol	64.44	64.99
CDX98776	Canola	cytosol	64.44	59.03
Solyc08g080040.2.1	Tomato	cytosol	65.83	56.7
Os06t0626700-00	Rice	cytosol	55.83	53.89
Os01t0372500-00	Rice	cytosol	55.83	53.6
PGSC0003DMT400058554	Potato	cytosol	65.28	51.65
Zm00001d038073_P001	Maize	cytosol	30.56	50.69
Zm00001d014914_P001	Maize	cytosol	55.56	50.63
EES04312	Sorghum	cytosol	56.11	50.63
Zm00001d048800_P001	Maize	cytosol	27.5	50.51
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	48.61	48.61
HORVU5Hr1G094280.1	Barley	cytosol, peroxisome	51.67	48.19
TraesCS6A01G041800.1	Wheat	cytosol	51.11	46.82
GSMUA_Achr10P...	Banana	cytosol	39.17	45.05
GSMUA_Achr10P...	Banana	cytosol	41.39	44.48
GSMUA_Achr3P07030_001	Banana	cytosol	40.83	44.14
GSMUA_Achr8P23330_001	Banana	cytosol	40.28	43.54
TraesCS6D01G004300.1	Wheat	cytosol	52.5	43.15
TraesCS6B01G006200.1	Wheat	cytosol	51.94	42.5
TraesCS6A01G001500.1	Wheat	cytosol	51.39	42.24
GSMUA_Achr10P...	Banana	cytosol	36.67	37.5
GSMUA_Achr11P...	Banana	cytosol	31.39	34.14
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	31.39	33.53
GSMUA_Achr6P15610_001	Banana	cytosol	32.78	33.52
GSMUA_Achr7P15540_001	Banana	cytosol	32.78	33.33
GSMUA_Achr1P00770_001	Banana	cytosol	31.11	33.23
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	31.39	33.14
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	31.11	33.04
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	30.83	32.94
GSMUA_Achr5P08490_001	Banana	cytosol	32.5	32.77
GSMUA_Achr9P04430_001	Banana	cytosol	30.28	32.73
GSMUA_Achr5P29330_001	Banana	cytosol	31.67	32.11
GSMUA_Achr6P32920_001	Banana	cytosol	29.17	32.01
GSMUA_Achr5P12830_001	Banana	cytosol	29.72	31.56
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	30.28	30.88
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	28.89	30.86
GSMUA_Achr2P19210_001	Banana	cytosol	29.17	30.09
GSMUA_Achr9P23620_001	Banana	cytosol	30.56	29.1
GSMUA_Achr9P15020_001	Banana	cytosol	27.5	28.21
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	28.61	27.03
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	28.89	26.67
GSMUA_Achr2P02770_001	Banana	cytosol	27.5	26.61
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	23.61	26.15
GSMUA_Achr7P16780_001	Banana	cytosol	26.39	25.47

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	MapMan:9.2.2.9.2	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006950	GO:GO:0007033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009611	GO:GO:0009719	GO:GO:0009753	GO:GO:0009987	GO:GO:0010023	GO:GO:0016043
GO:GO:0016491	GO:GO:0019748	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G04080_001	EnsemblPlants:GSMUA_Achr5P04080_001
EnsemblPlants:GSMUA_Achr5T04080_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0SVI7	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF190	SUPFAM:SSF51197
UniParc:UPI000296C4F7	SEG:seg	:	:	:	:

Description

Leucoanthocyanidin dioxygenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G04080_001]

Coordinates

chr5:-:2913064..2914465

Molecular Weight (calculated)

40677.2 Da

IEP (calculated)

5.681

GRAVY (calculated)

-0.297

Length

360 amino acids

Sequence
(BLAST)

001: MATKVVSVAP RVEILAKSGI NEIPTEYVRP ESERLDLGDA FEEVKKAAEG PQIPVVDLQG FDSPDEEVRR ACVEEVRKAA TEWGVMHIVN HGIPLELVEQ
101: LRKVGKEFFD LPIEQKEQYA NDQSSGKIQG YGSKLANNAS GQLEWEDYFF HLIFPEEKIN ISIWPKQPTD YIEVTKKFGR QLRAVVTKML EVLSLGLGLE
201: EGKLDRELGG MEDLLMQLKI NYYPICPQPD LALGVEAHTD ISALSFILHN MVPGLQIYYG GRWVTAKCVP DSIIMHVGDC LEILSNGQYK SILHRGLVNK
301: EKVRISWAVF CEPPKDKIVL KPLEELVADG TPAKFPPRTF EQHIQHKLFK KTRGDFKTPN

Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)

001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND

Arabidopsis Description

LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.