Factsheet for Bra013652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41286	Canola	cytosol	99.72	99.72
Bra019350.1-P	Field mustard	cytosol	93.02	93.28
AT4G22880.2	Thale cress	cytosol	90.78	91.29
KRH77456	Soybean	cytosol	77.37	78.69
KRH27988	Soybean	cytosol	76.26	77.56
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	76.82	77.46
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	65.64	65.28
Solyc08g080040.2.1	Tomato	cytosol	74.58	63.88
PGSC0003DMT400058554	Potato	cytosol	74.02	58.24
Zm00001d038073_P001	Maize	cytosol	29.33	48.39
Zm00001d048800_P001	Maize	cytosol	26.26	47.96
Zm00001d014914_P001	Maize	cytosol	52.51	47.59
EES04312	Sorghum	cytosol	52.51	47.12
Os01t0372500-00	Rice	cytosol	48.04	45.87
Os06t0626700-00	Rice	cytosol	47.77	45.84
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	43.3	43.06
HORVU5Hr1G094280.1	Barley	cytosol, peroxisome	46.09	42.75
TraesCS6A01G041800.1	Wheat	cytosol	43.85	39.95
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	37.43	39.88
Bra018076.1-P	Field mustard	cytosol	31.84	37.38
Bra038648.1-P	Field mustard	cytosol	31.01	37.37
TraesCS6D01G004300.1	Wheat	cytosol	44.97	36.76
TraesCS6A01G001500.1	Wheat	cytosol	44.97	36.76
Bra037747.1-P	Field mustard	cytosol	32.12	36.62
TraesCS6B01G006200.1	Wheat	cytosol	44.97	36.59
Bra038647.1-P	Field mustard	cytosol	30.73	35.83
Bra034168.1-P	Field mustard	cytosol	28.77	35.64
Bra029211.1-P	Field mustard	cytosol	30.17	34.84
Bra005860.1-P	Field mustard	cytosol	35.47	34.14
Bra014716.1-P	Field mustard	cytosol	34.08	33.33
Bra017132.1-P	Field mustard	plastid	32.4	32.77
Bra000045.1-P	Field mustard	plastid	31.84	32.29
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	30.45	31.87
Bra028752.1-P	Field mustard	cytosol	32.96	31.72
Bra029414.1-P	Field mustard	plastid	29.33	30.79
Bra000713.1-P	Field mustard	plastid	29.33	30.0
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	29.05	29.63
Bra012862.1-P	Field mustard	cytosol	28.77	29.43
Bra036828.1-P	Field mustard	cytosol	29.05	29.05
Bra037921.1-P	Field mustard	cytosol	28.21	28.77
Bra034861.1-P	Field mustard	cytosol	31.84	28.15
Bra014831.1-P	Field mustard	cytosol	24.02	26.71
Bra017227.1-P	Field mustard	cytosol	27.37	26.7
Bra014500.1-P	Field mustard	cytosol	26.54	26.61
Bra029212.1-P	Field mustard	cytosol	31.01	26.3
Bra004867.1-P	Field mustard	cytosol	25.7	25.63
Bra028696.1-P	Field mustard	cytosol	24.86	24.65
Bra009771.1-P	Field mustard	mitochondrion	28.77	24.64
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	18.99	24.64
Bra007204.1-P	Field mustard	cytosol	32.12	18.52

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.9.2	EnsemblPlantsGene:Bra013652	EnsemblPlants:Bra013652.1	EnsemblPlants:Bra013652.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DAZ2
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF190
SUPFAM:SSF51197	UniParc:UPI00025458F9	SEG:seg	:	:	:

Description

AT4G22880 (E=3e-184) LDOX, TDS4, TT18, ANS | LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE); leucocyanidin oxygenase

Coordinates

chrA01:-:6875692..6877113

Molecular Weight (calculated)

40878.3 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.393

Length

358 amino acids

Sequence
(BLAST)

001: MVAVERVESL AKSGISSIPR EYIRPKEELE SINDVFQEEK KEDGPQVPTI DLQDIESEDE TIREKCIEEL KKAAMDWGVM HLINHGIPVE LMERVKKSGE
101: EFFGLPVEEK EKYANDQASG KIQGYGSKLA NNASGQLEWE DYFFHLVYPE DKRDLSLWPK TPTDYIEATS EYAKCLRLLA TKVFKALSIA LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWIIA KCVPDSIVMH IGDTLEILSN GRFKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFRNKQEEL VTEKKDEV

Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)

001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND

Arabidopsis Description

LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.